Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3563 ATGGACTTAAAGATTAATGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTGGCTATTCGTCTTCTTCTCCATGCACAAATACACCAAACCCTAATTATCCGGATCACTCAGATTTACCGATGTCATCGTCTCACAAGAAGAGGACAGGGAGGAAGAAGTTTAATGAGACTCGGCACCCGCTGTACCGCGGTGTCCGGCGCCGGAACGGCGACAAATGGGTGTGTGAAGTCCGAGAGCCAAACAAGAAGTCAAGGATTTGGCTCGGAACTTACCGCACTCCGGAAATGGCTGCTAAGGCTTATGACGTGGCAGCCCTTGCCCTCCGGGGCTCTTCCGCTGCCCTTAATTTCCCCAGCTTGGCTTCGCTCCTTCCGGCCCCCTCCTCATCCTCCTCCCGAGACATCCAAGCGGCCGCCGCCAGAGCCGCCGAAGCTTTTCGACCGACATCCCCTCACCAGAAGAACTTGAAGCAGTGCTGCGGTAATAACGAGGTTGTCGAGGGACTAGAGATTGATAATATTAATAATAATAATGATGATGATGATTGTGAGTGTAATGGAGGGATGTTCTTGGATGAAGAGGCGTTGTATAATATGCCAGGTTTGTTGGATAGTATGGCGGAGGGTTTGCTTATGAGCCCTCCTAATTTTATGAACACAGCTTTGGGTGGGGACGATGAATTTACTTGCCAAATAGACTTGACTTTATGGAATTACTAA 729 0.4842 MDLKINESSSSSSSSSSSSCGYSSSSPCTNTPNPNYPDHSDLPMSSSHKKRTGRKKFNETRHPLYRGVRRRNGDKWVCEVREPNKKSRIWLGTYRTPEMAAKAYDVAALALRGSSAALNFPSLASLLPAPSSSSSRDIQAAAARAAEAFRPTSPHQKNLKQCCGNNEVVEGLEIDNINNNNDDDDCECNGGMFLDEEALYNMPGLLDSMAEGLLMSPPNFMNTALGGDDEFTCQIDLTLWNY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3563 242 MobiDBLite consensus disorder prediction 1 42 - -
Bisa02g3563 242 CDD AP2 63 120 IPR001471 GO:0003700|GO:0006355
Bisa02g3563 242 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Bisa02g3563 242 PRINTS Ethylene responsive element binding protein signature 103 123 IPR001471 GO:0003700|GO:0006355
Bisa02g3563 242 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Bisa02g3563 242 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Bisa02g3563 242 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Bisa02g3563 242 SUPERFAMILY DNA-binding domain 64 121 IPR016177 GO:0003677
Bisa02g3563 242 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 10 242 IPR045277 GO:0003700
Bisa02g3563 242 MobiDBLite consensus disorder prediction 1 66 - -
Bisa02g3563 242 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bisa02g3563 242 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Bisa02g3563 242 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3563 Bisa-ChrBisa02 87649616 87650344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3563 38 242 AP2-EREBP Transcription Factor Family AT4G25470 45.673 6.77e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa02g3563 AP2 2.1e-13 CL0081