Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3548 ATGACAGATAAATCTATACTTGGAAATGATGATGCTTTAGATGCAAAGAAAATTAATAGAGTGAAAGAGAAGGTGTCTGGAATTTTCTTGGACAACCAGGAATCCTACCAGACCGCCTCTTTGTGTTTGCGTGGAGGTTCTTTTCTTTGGAGCCTTTCCTTCATTTTTCTATTATTAGAGATTCCCTTCTTTGTTTCCCCTTCGACTCCTTTATCTTCCATTTTCCATCTCCCTTATCTTTCCCGGAAAATCCTAGATTCGCCTGGTCTTCCCTTTGCATCGGCGGTTTTCCTCATTCGACCGAGACTTAACCAAAGAAAACTAAAGAAAATGGCAGAAGAACATAGATGCCAAGCTCCGCCCCTATGTGCAAACAACTGCGGCTTCTTCGGCAGCCCGGCGACGCAAAATCTATGTTCGAAATGCTACCGAGATTTGCAGCTCAAGGAACAACAATCCTCCTCAGCGAAGCTGGTTCTCAATCAATCCCTAGTCCCTCCTCCATCTACGACCACGAAATCGGAACCATCGTCTTCGTCGCCAGAACCGATAGCCGTCCCTTCGTCATTGATTGCGGCTGATCCGCCGCTTGTGGCGGAGGAGGTGAAGAGTGCATCGCCGGCGCAGCCCAGCAGGTGCTTGACGTGCAAGCGGCGCGTGGGGCTCACGGGGTTTAAGTGCCGGTGCGGTTTGACATTCTGCGGGGCCCACCGTTACCCGGAACAGCACGGATGCGAGTTTGACTTCAAAATGATGGGTAGAGAGCAGATCGTGAAGGCGAATCCCGTAGTGAAGGCGGAGAAGCTCGAAAAGATCTGA 819 0.4969 MTDKSILGNDDALDAKKINRVKEKVSGIFLDNQESYQTASLCLRGGSFLWSLSFIFLLLEIPFFVSPSTPLSSIFHLPYLSRKILDSPGLPFASAVFLIRPRLNQRKLKKMAEEHRCQAPPLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLVPPPSTTTKSEPSSSSPEPIAVPSSLIAADPPLVAEEVKSASPAQPSRCLTCKRRVGLTGFKCRCGLTFCGAHRYPEQHGCEFDFKMMGREQIVKANPVVKAEKLEKI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3548 272 MobiDBLite consensus disorder prediction 159 186 - -
Bisa02g3548 272 FunFam Zinc finger AN1-type containing 6 190 268 - -
Bisa02g3548 272 SMART A20_3 120 144 IPR002653 GO:0003677|GO:0008270
Bisa02g3548 272 ProSiteProfiles Zinc finger AN1-type profile. 207 253 IPR000058 GO:0008270
Bisa02g3548 272 ProSiteProfiles Zinc finger A20-type profile. 117 151 IPR002653 GO:0003677|GO:0008270
Bisa02g3548 272 Gene3D - 110 181 - -
Bisa02g3548 272 Pfam AN1-like Zinc finger 215 249 IPR000058 GO:0008270
Bisa02g3548 272 SMART AN1_Zf_4 213 250 IPR000058 GO:0008270
Bisa02g3548 272 PANTHER AN1-TYPE ZINC FINGER PROTEIN 119 272 - -
Bisa02g3548 272 Pfam A20-like zinc finger 122 144 IPR002653 GO:0003677|GO:0008270
Bisa02g3548 272 SUPERFAMILY AN1-like Zinc finger 205 267 IPR035896 -
Bisa02g3548 272 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 169 - -
Bisa02g3548 272 Gene3D - 188 268 IPR035896 -
Bisa02g3548 272 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3548 Bisa-ChrBisa02 87294012 87298243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3548 111 272 C2H2 Transcription Factor Family AT3G52800 51.176 2.03e-44 146