Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3533 ATGTACCATCAAGGGAAGAACATGCATTCTTCTTCTTCCAGAATGCCAATCCCATCTGAGAGACATATGTTCCTTCAAACTGGCAATGGGTCTGGTGATTCTGGGCTTGTCCTCTCCACTGATGCTAAGCCTAGATTGAAATGGACACCAGATCTTCATGCCAGATTTATAGATGCAGTCAATCAGTTAGGTGGAGCTGACAAGGCAACTCCTAAAACAGTAATGAAACTCATGGGGATTTCAGGGCTTACCTTGTATCATTTGAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAATCTGCATGGACAAAGCAACAATGTGACACACAAAATCAGTGCAGCAACGAGCGAAAGACTTTCTGAAACAAATGGAACTCATGTGAACAATTTAAGCCTTGGGCCACAGGCTAACAAAGATTTACACATAGGCGATGCCCTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAGCAACTTGAGGTACAGAGGCACTTGCAGCTTCGGATAGAGGCTCAAGGGAAATATCTGCAGGCTGTGCTGGAGAAAGCTCAAGAAACACTTGGAAGACAGAATTTGGGGATAGTAGGACTTGAAGCAGCTAAAGTTCAACTCTCAGAGCTTGTGTCTAAAGTATCCTCTCAGTGTCTGAATTCTGCATTTTCAGAACTGAAGGAATTACAAGGATTCTGCCCACAAAACAACCAGCCTACCGACTGCTCAATGGACAGCTGCCTCACATCCTGCGAGGGATCTCAAAAGGAGCAAGAAATACAGAACGGAGGGATGGGCTTACGACCCTTCAATGGCCATGCCTTCATGGAACAAAAAGAAGCCATGGAAGCACTCAAGTGGTGCGATGAAGTGAAAAAGAACAACACCCCCACCTTTCTCAGCAACCCTTTGGCCAAGAATGGAGAAAGAAGAGGCTACGCTGCCGAAAGCAGTCCCAGCAACTTAACAATGAGCATTGGACTTGAAAGAGACATAGAGAACAATGGAAGCAAAATGTATCCTGCTGAGAGATCAATGATGGGGAGAGAGCCAGATGGTGAATTCCATCACCGAAGCACCAGCAAGCCCGAGTCAGTAAAGCCAGTGGAAGAAAAGGTTTCTCAAGACTACAGATTGCCTTACTTTGCAGCAGCAAGACTGGACCTGAACACCCGTGAAGAAAACGATGCTGCAATGAGCTGTAAACAACTGGACTTGAATGGATTCAGCTGGAGCTGA 1236 0.4579 MYHQGKNMHSSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIDAVNQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISAATSERLSETNGTHVNNLSLGPQANKDLHIGDALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQNNQPTDCSMDSCLTSCEGSQKEQEIQNGGMGLRPFNGHAFMEQKEAMEALKWCDEVKKNNTPTFLSNPLAKNGERRGYAAESSPSNLTMSIGLERDIENNGSKMYPAERSMMGREPDGEFHHRSTSKPESVKPVEEKVSQDYRLPYFAAARLDLNTREENDAAMSCKQLDLNGFSWS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3533 411 MobiDBLite consensus disorder prediction 344 371 - -
Bisa02g3533 411 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Bisa02g3533 411 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 278 IPR044848 GO:0003700
Bisa02g3533 411 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
Bisa02g3533 411 Gene3D - 42 100 - -
Bisa02g3533 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Bisa02g3533 411 Pfam MYB-CC type transfactor, LHEQLE motif 142 188 IPR025756 -
Bisa02g3533 411 FunFam Myb family transcription factor 42 100 - -
Bisa02g3533 411 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Bisa02g3533 411 MobiDBLite consensus disorder prediction 343 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3533 Bisa-ChrBisa02 87043044 87045404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3533 75 411 G2-like Transcription Factor Family AT3G04030 50.000 5.69e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa02g3533 Myb_DNA-binding 6.2e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1083 12 17533051 17543759 Bisa02g3533 02 87043044 87045404 CCT