Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3532 ATGGAATTACAACTACCTGCAACATCTGCAGTACCGACGAACAATGGTCCTCAGATCCATGACGCTGCGACTTCTATAGCGAAGAAGAATGAAGAATTAGATGGAAAAAGCGGGAGGGAGAGGCTGAAGAGGCACCGGGAAGAGGTGGCGAGGGAGGTCGTGAGGGTGCCTGATAAGTGGGGGAAGGAGCAATTGATGAAGGATTGGATCGATTTTGCTAATTTCGATGCATTCTGGGCTCCTCGCGCCATCATTCTTGCTGCTCGCGATGCGCTTATTGCTGATGCCACAAACTCCAGTAAGCTTCAGAGTGATGCTCTAAGAGAAGCTATCTCAGGAATCATGGCTGATTCCAAGGAGAAAAATCGTAAGTTTGTGGAGACCATTGAACTCCAGATTGGGCTGAAAAACTATGATCCTCAGAAGGATAAGCGGTTTAGCGGTTCTGTGAAGTTGCCTCACATCCCTCGCCCCAAGATGAAAATATGCATGCTGGGAGATGCTCAACACGTTGAAGAGGCTATCAAGATAGGGTTGGACTATATGGATGTGGAAGCGCTGAAGAAGCTAAACAAAAATAAGAAATTGGTTAAGAAACTTGCCAAAAAATACCATGCCTTTTTAGCTTCTGAAGCAGTCATTAAGCAGATTCCCCGTCTTTTGGGTCCTGGTCTCAACAAGGCAGGGAAATTCCCCACGCTTGTTACTCACCAAGAATCTCTAGAGTCTAAGGTTAATGAGACCAAGGCTATGGTTAAATTTCAGCTAAAGAAGGTGCTTTGCATGGGAGTTGCCGTGGGGAATGTCAGTATGGAGGAGAAACAAATCTTCCAAAATGTACAAATGAGCGTTAACTTCCTTGTTTCCTTGTTGAAGAAGAATTGGCAGAATGTGAGGTGCTTGTATCTGAAGAGCACAATGGGGAAATCATATCGCGTTTTCTGA 945 0.4529 MELQLPATSAVPTNNGPQIHDAATSIAKKNEELDGKSGRERLKRHREEVAREVVRVPDKWGKEQLMKDWIDFANFDAFWAPRAIILAARDALIADATNSSKLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAIKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3532 314 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 109 308 - -
Bisa02g3532 314 CDD BIC1_CID 38 95 - -
Bisa02g3532 314 Pfam Ribosomal protein L1p/L10e family 120 308 IPR028364 -
Bisa02g3532 314 MobiDBLite consensus disorder prediction 1 20 - -
Bisa02g3532 314 ProSitePatterns Ribosomal protein L1 signature. 214 233 IPR023673 -
Bisa02g3532 314 FunFam Ribosomal protein 163 252 - -
Bisa02g3532 314 CDD Ribosomal_L1 107 313 IPR028364 -
Bisa02g3532 314 FunFam Ribosomal protein L10a 99 217 - -
Bisa02g3532 314 Gene3D - 119 309 - -
Bisa02g3532 314 Gene3D - 163 252 IPR016095 -
Bisa02g3532 314 FunFam Ribosomal protein 235 312 - -
Bisa02g3532 314 SUPERFAMILY Ribosomal protein L1 101 314 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3532 Bisa-ChrBisa02 87005906 87010434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3532 100 314 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 88.837 5.15e-126 357