Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3517 ATGGACGATCAGAATCCCCCACCTGGCTTTCGTTTCTACCCCACCGAGGAAGAGCTCGTCTCCTTCTACCTCCGCAACAAGCTCCAAGGCCTCCGTGACCGCGACTTCGACAGAGTCATCCCCGTCATTCCCATCTACGACCTCGAGCCCTGGCACCTCCCACAGGTTGCAGGGGAGGCGTGTCGTGGGGATACAGAGCAGTGGTTCTTCTTCGTGCCGATCCAGGATAGGGAGGCCAGAGGAGGGAGGCCCCACAGAACCACGCCGTCCGGCTACTGGAAGGCCACCGGGTCCCCCGGGTACGTGTACTCGTCGGAGAACGCGGTGATTGGGGTGAAGAAGACGATGGTGTTTTACAGAGGCAGAGCTCCCACTGGAAGAAAAACCAAGTGGAAGATGCACGAGTACAGAGCCATTGAACCCTCCAACTGTGATCAATCTACTCCCGCCATTCCTAAGTTGAGGCACGAATTCAGCCTGTGTCGAGTTTACGTGATATCAGGATCCTTCCGAGCATTTGATCGGCGGCCGTTAGAGGCAGGGCTTCGCGGTGATGTAGCACCTCCAGCGGCAACAACAACGATTGCAAGTGCTGCTCATCAAGAAGGCGATGATGTGGACCGCTCTAGCTCCTCTGGATCTTCCCACTCTGGAGGAGACCACAACAATGGCAATGTCGCATCAAGTAGTACTGCAAGTTGGAGTATCAATAACGGAATAGTACAAGAGCCTCTATGGGAATGGGAACAACTTAACTGGCTCTAA 765 0.5516 MDDQNPPPGFRFYPTEEELVSFYLRNKLQGLRDRDFDRVIPVIPIYDLEPWHLPQVAGEACRGDTEQWFFFVPIQDREARGGRPHRTTPSGYWKATGSPGYVYSSENAVIGVKKTMVFYRGRAPTGRKTKWKMHEYRAIEPSNCDQSTPAIPKLRHEFSLCRVYVISGSFRAFDRRPLEAGLRGDVAPPAATTTIASAAHQEGDDVDRSSSSGSSHSGGDHNNGNVASSSTASWSINNGIVQEPLWEWEQLNWL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3517 254 MobiDBLite consensus disorder prediction 197 230 - -
Bisa02g3517 254 Gene3D NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Bisa02g3517 254 MobiDBLite consensus disorder prediction 210 230 - -
Bisa02g3517 254 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
Bisa02g3517 254 ProSiteProfiles NAC domain profile. 6 166 IPR003441 GO:0003677|GO:0006355
Bisa02g3517 254 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 197 - -
Bisa02g3517 254 SUPERFAMILY NAC domain 4 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3517 Bisa-ChrBisa02 86793191 86795181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3517 9 253 NAC Transcription Factor Family AT5G22380 56.000 7.69e-91 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g3517 NAM 1.2e-31 No_clan