Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3492 ATGTCGTCGTCGTCTCATCCCCCGGACCAGATCATCCACTCCATGAAACGCCAACTCCCATTCTCGTCCATGAAGCCGCCCTTTGTTGCTCCCGCTGATTATCATCGCTTCGCGCCCGACAATAGCCGAACTGCTGACCAAGAAGCCGAGACCATCGTCGTTAAGTCCCCTCAATTGAAGAGGAAGAGTAGCGCAGCCAATTCTGAAGCTTACTCTGTTGATAGGATGATCCCAGTATCCACTGAAGCAGCCAATAGTCCTTTTCAGACCCCGATATCAGGAAAAATGGGGAAGGCAAGCAAAGCCTCGAAGCTTACAAAATGCAACAAAGCTGGACCTCAAACTTCAGGATCAAATATTGGTTCTCCTTCTGGCAATAATCTCACTCCTGTTGGTCCATGTCGTTACGACAGCTCTTTAGGTCTGTTGACAAAGAAGTTCATCAATTTGATCAAACAAGCAGAGGATGGTATTCTTGATCTGAATAAAGCTGCTGACACATTAGAGGTGCAAAAGAGGAGGATATATGATATAACTAATGTTCTTGAAGGGGTTGGTCTTATAGAAAAAAAGCTTAAAAACAGAATTCAATGGAAGGGATTGGATATGTCAAGGCCAGGAGAGGCTGATGATAATTTTGCTAGTTTGCAGGCAGAAGTTGAAAATCTTACTCTGGAGGAGCACCGGTTGGATGAACAAATAAGGGAGATGCAAGAAAGACTGAGGGTCCTTGGTGAAGACGAAAACAATCAGCAGTGGCTTTTTGTTACTAAAGATGATATAAAGGGTTTGCCCAGCTTCCAGAATGAAACCTTAATAGCCATTAAAGCTCCACATGGCACCACTCTGGAGGTCCCTGATCCTGATGAGGCTGTTGATTATCCCCAAAGAAGATACAAGATAGTCCTCAGAAGCACAATGGGCCCGATAGATCTTTACCTTGTTAGTCAATTCGAAGAAAAGTTTGAGGAAAACAATTCAGTTGATACAGCACCCAATCTTCCATCCAGTCCAGAGTTTAACAGGCATCCAGCGACAGTGAACACTGAGGAAAGAGGCAAGGACATAGAAATGCCAGGACAAGATGGTCATAGAGCTTGTTCAGATTTTAGTGCCTCACAAGACTTCGTTAGTGGGATCATGAAGATTGTTCCGTCAGATGTTAATAGTGATGCTGATTACTGGCTTCTCTCAGATGCTGATTTTAGCATAACGGACATGTGGAGAACAGAACCTGGAGTTGAATGGAATGAACTGGATACGCTTCATGAAGATTGTTGTGAGCCGCAGGTAAACACACCCCAACCTGAAACTCCTCTTTTAAACACCAGTCAGGTGCCTTCAGCTAACCCAGACGGAGCTCATATAAGGAACCAAGAGTGGCCACTCTGGGCAGATGACTCATTGTACAGTAATACACTAAATCTGAGCAATGTTGTGCCTCAAGAAAAGCATCTAGCAGCTCTACTGGATCCAACATTGTATATTACTGTAATTCCTGGCTTGAAGCATTTAGCTCATTCTCTCCTTCAGTAA 1536 0.4421 MSSSSHPPDQIIHSMKRQLPFSSMKPPFVAPADYHRFAPDNSRTADQEAETIVVKSPQLKRKSSAANSEAYSVDRMIPVSTEAANSPFQTPISGKMGKASKASKLTKCNKAGPQTSGSNIGSPSGNNLTPVGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGVGLIEKKLKNRIQWKGLDMSRPGEADDNFASLQAEVENLTLEEHRLDEQIREMQERLRVLGEDENNQQWLFVTKDDIKGLPSFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYKIVLRSTMGPIDLYLVSQFEEKFEENNSVDTAPNLPSSPEFNRHPATVNTEERGKDIEMPGQDGHRACSDFSASQDFVSGIMKIVPSDVNSDADYWLLSDADFSITDMWRTEPGVEWNELDTLHEDCCEPQVNTPQPETPLLNTSQVPSANPDGAHIRNQEWPLWADDSLYSNTLNLSNVVPQEKHLAALLDPTLYITVIPGLKHLAHSLLQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3492 511 CDD E2F_DD 211 317 IPR032198 GO:0046983
Bisa02g3492 511 Gene3D - 207 317 - -
Bisa02g3492 511 SUPERFAMILY E2F-DP heterodimerization region 213 317 IPR037241 -
Bisa02g3492 511 Coils Coil 151 171 - -
Bisa02g3492 511 Coils Coil 213 247 - -
Bisa02g3492 511 FunFam E2F transcription factor 1 129 202 - -
Bisa02g3492 511 SUPERFAMILY "Winged helix" DNA-binding domain 135 198 IPR036390 -
Bisa02g3492 511 Gene3D - 130 202 IPR036388 -
Bisa02g3492 511 Pfam E2F/DP family winged-helix DNA-binding domain 137 200 IPR003316 GO:0005667|GO:0006355
Bisa02g3492 511 PANTHER TRANSCRIPTION FACTOR E2F 69 414 IPR015633 GO:0000978|GO:0006357
Bisa02g3492 511 SMART E2F_TDP_2 135 200 IPR003316 GO:0005667|GO:0006355
Bisa02g3492 511 Pfam E2F transcription factor CC-MB domain 216 316 IPR032198 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3492 Bisa-ChrBisa02 86486325 86490948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3492 10 439 E2F-DP Transcription Factor Family AT5G22220 56.455 6.72e-156 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bisa02g3492 E2F_CC-MB 2.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3492 02 86486325 86490948 Bisa02g3492 02 86486325 86490948 ECH