Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3488 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGACGTGGAGCTTTTGGAGCTGCTATTCTAGTCCATCACAAGGCCGAGAAGAAGAAGTATACACCGTCGTTTCTCTTTGGGGTCCCGCATTTGAATGAATTATACGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGCTGCCGGAGATCTGCTCATCAAGAGATGGCTCTCATTGCTCGAATCCAGCACCCTTACATTGTAGAATTTAAAGAAGCATGGGTTGAGAAGGGTTGCTATGTCTGTATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCGAATGGGGTTTGCTTTCCTGAGGAGAAACTCTGTAAGTGGTTTACCCAATTACTTTTGGCTGTGGAGTACCTGCATTCTAACTTTGTTTTACATCGTGACCTGAAGTGTTCCAACATCTTTCTCACCAAGGATCAAGATGTGCGCCTAGGGGATTTTGGGCTCGCTAAGACACTAAAAGCAGATGACCTGGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAATTGCTTGCAGATATTCCTTACGGATTCAAATCTGATATTTGGTCACTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTCAAAGCTTTTGATATGGCGGGATTGATAAGCAAAATAAACCGTTCCTCTATTGGCCCTTTGCCTCCCTGTTATTCCCCATCCTTGAAAACACTGATAAAGGGCATGCTGAGAAAAAACCCTGAGCATCGGCCAACAGCATCTGAGATCTTAAAGCATCCTTATTTGCAACCTTATATTGAACAGTATCGTCCATCTTTCAATCCTCCAACAGCCTGTTCTCCCGACAAGCCAATTTCTGCTGTCCATGATCCTCGAAGAAATATGGCTGAAAGTCAAAACAGTAGCAGTTCAAGTAGTGATAAAGATAGTTCGATGTCAAATGAGAGAAACTTTTCGACAATGGCACTGAAGTGTAATAACAAAGCCATGGAAACAGGTCAGGCCTCTATTGATGATGAAGATGACTCCGAGCATCACCTGCCCAGTGAAGAAGAAAATAACTCCAGAACTGGCAATCGCAAAACAGATGGCCAAGAGGTGGCGGTTAATGAACAGCGATCAATAGTTGAATCTAAGCAACCAAAAACAATTAGAAATATTATGATGGCTATAAAAGAAGGAAAAGTTAGAGAAAGTTCTCCAATGAGAGGTAATCGCATAAAGGCTGGTGTTGTATCAATGCAGAAAGCAAATGCGGAGACATTGCCTAAATTGCCCAATTCTAATGCTGTTGCTCCTGGTTTCAAGCCTAATTCAGAGTCTCCAACTGTTGCACCTGCAAAGACCAGCCCTGATCCTACAAAACGAATTCAGGGGTCACATCCTTTAAAGAATCAGGTACTGATGATGGACTCTTCACCAAAAACTAAACCCAGGCATGATGGGACTCCCCTATCTGGTCCTATTAACCAAGTAGATGGAGATGGAGTTTCTACCAAGTTGAGGCAAAGGACCCCCCCAAGCTTACTCAGACAACCTTCATTTCGAGGAGGAATGAGGCAGGTTGGGATTGATGTTCCTAATGCAGCAAGTGATACAGAGAAGTTAGGTCCAAATAAAAGTCCTCGGGAGCCTGACAAGAGTCAAAGTCATTTGACCAATGGTCATTTACCACATGTTTCTAGAGAGATTACAGAACCTCAGAAGGCTTATGAAAAATGTTCCAAAGGAATGCAAATGGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATTCAAGGATTTGAACTTTCTGATGATGCAACAAATTTTATTGACATGAGAGAACAGGCACTTCCTGATCACGAGCGTACAACACACATTGAAAGTGTAAAATCATATCCAGACAGCGGTACACCTGCTACATATTTACATTCTGAAGCAGCTGAAAATATATCTGGGGAAACCTCTGAAACTGCCCTGAATCTTCAGAATACGACTACTAATAATGAGAAACTTTCTAGTTTAACTCCTAATCACCCTGTTCAAGATTCTAAGGAAATGTTTGTTTCTAAAGGTCTACCCATCAATCAGATTAGTATATCTGCTGCCACTTCTTGTGATAACAGATCTACAGGTTGCTCTGTTAAAGCCACCGAAGCAATCAAAGATATTCAAGATGCTACTAAGCAACTGACTTCAACCAACTCTCTCAAACTTCCTCAAGTGAGTTCTGGAGAAACGTTTGCTTTTGAAGAAGTTGGTCCAGTAAGTAAGCCCAATAATATGCCTGATATAGCTAGCCAGCCAAAACCTGTGTGCATATCTACTGGCGATGACAAGTTCACTGTAAGAGAGAGACTGTCATCAGTGGCTGAAACTGCCCTGCCTATTGCTGTCACCAATAGCCAGAAAGGTATGCAAGAAGAGAAAGGAACCATTTTGCAGAATCCAATGACAGAAAGGTCGGCTGTTGGTAATCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGGCATAGCAGTTATCGTGTCGGGAGTGAGCAGCCAGTAAAGGAATCTACAGAGATGGGAATTCAAAATGTGGATGTTGGTAAGTTTCTCAACGTAGTAAGGGATGATTTAGAAATGAGAAACATGAGCACTCCTCTTACCCTTAAATCTTCAAGTTGCCCTGAAGTTATGAGCCTGAAGTCAAACATTTCTGATCAATTAGAAGTGAGAAACATTAACACTCCTCCAGCCGTCAAATCTTCAAGTTCCTCTGATGCTTTGAGCGGGAAGTCAAATATTTCTGATCATTCTGGTGTCAAGGAACTAGATGTGAAGAATCCTGTTCCAATGGATTTAAAATCTGATTCCTCTGAGTTGACTAGACATAACTCTTCAATGACTGAAGAGGAAACACCAGCAAAGGAAACTTTGGATGTTAAATCATTTAGGCAGAGAGCAGACGCCCTTGAAGGCCTCCTGGAGTTGTCTGCAGAGTTGCTGCAGCAAAATAGATTGGAGGAACTTGCAGTTGTTCTGAAACCCTTTGGGAAAGATAAGGTCTCTCCAAGAGAGACAGCCATTTGGTTAGCCAAGAGCTTGAAAGGAATGATGAGCGAGGAGAATGGAGGACGCTGTTCATGA 3162 0.4254 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYTPSFLFGVPHLNELYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVCFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEILKHPYLQPYIEQYRPSFNPPTACSPDKPISAVHDPRRNMAESQNSSSSSSDKDSSMSNERNFSTMALKCNNKAMETGQASIDDEDDSEHHLPSEEENNSRTGNRKTDGQEVAVNEQRSIVESKQPKTIRNIMMAIKEGKVRESSPMRGNRIKAGVVSMQKANAETLPKLPNSNAVAPGFKPNSESPTVAPAKTSPDPTKRIQGSHPLKNQVLMMDSSPKTKPRHDGTPLSGPINQVDGDGVSTKLRQRTPPSLLRQPSFRGGMRQVGIDVPNAASDTEKLGPNKSPREPDKSQSHLTNGHLPHVSREITEPQKAYEKCSKGMQMDSSNSVSSSVSIQGFELSDDATNFIDMREQALPDHERTTHIESVKSYPDSGTPATYLHSEAAENISGETSETALNLQNTTTNNEKLSSLTPNHPVQDSKEMFVSKGLPINQISISAATSCDNRSTGCSVKATEAIKDIQDATKQLTSTNSLKLPQVSSGETFAFEEVGPVSKPNNMPDIASQPKPVCISTGDDKFTVRERLSSVAETALPIAVTNSQKGMQEEKGTILQNPMTERSAVGNLPPAFDDVIHVIRHSSYRVGSEQPVKESTEMGIQNVDVGKFLNVVRDDLEMRNMSTPLTLKSSSCPEVMSLKSNISDQLEVRNINTPPAVKSSSSSDALSGKSNISDHSGVKELDVKNPVPMDLKSDSSELTRHNSSMTEEETPAKETLDVKSFRQRADALEGLLELSAELLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGMMSEENGGRCS 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 308 330 - -
Bisa02g3488 1053 Gene3D Transferase(Phosphotransferase) domain 1 105 395 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 486 584 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 962 983 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 347 387 - -
Bisa02g3488 1053 Pfam Protein kinase domain 8 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 914 983 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 439 474 - -
Bisa02g3488 1053 SMART serkin_6 8 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 507 525 - -
Bisa02g3488 1053 CDD STKc_Nek 7 277 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 354 374 - -
Bisa02g3488 1053 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1001 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 914 942 - -
Bisa02g3488 1053 SUPERFAMILY Protein kinase-like (PK-like) 4 336 IPR011009 -
Bisa02g3488 1053 Gene3D Phosphorylase Kinase; domain 1 1 102 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 447 474 - -
Bisa02g3488 1053 ProSiteProfiles Protein kinase domain profile. 8 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3488 1053 FunFam Serine/threonine-protein kinase Nek5 105 350 - -
Bisa02g3488 1053 MobiDBLite consensus disorder prediction 287 330 - -
Bisa02g3488 1053 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3488 Bisa-ChrBisa02 86450421 86457355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3488 30 278 MAP Kinase Kinase Kinase AT1G53570 31.154 2.49e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bisa02g3488 Pkinase 5.6e-60 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1050 12 17036062 17041241 Bisa02g3488 02 86450421 86457355 CCT