Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3475 ATGGCCTCTACGTACTATCATGGCGGGAATTCAGAGATCCAATCCTCTGCGGATGGCTTACAGACGCTCTATCTCATGAACCCGACCTACGTACCCTACTCTGACACTACTAACCACCCCACAACGCCAAACATGTTTCTCCTCAATCCCAGCACCACTCCCCACGCCGGCCACGCGCTCAATCTCCCCAACCTCCCCCACGCGCCGTCTCCTTCCCACCACAACCACGCCCTCCTCGGCCTTATTCCCCCCAACATCCTCGGATCCAACAATCACACCGACATCACCGCCTTCCACGGCATCTCCACCACCGCCCCTCGGTTGAACTATAACTTGTGGGGCTCAAGCTCAGTAATTGATCATCAAACGCCGTCATCGCCGGCTGCGGCGGCTACCCCGTCCAGCAGTTCCGGAGGAGCAGCAGCTTCTGGTTTCCAGAGGCCGAGTCAACAGAGCTTGTCTCTGAGCCTTTCGTCGCAACAGACGGCGTATAACAGGTCGTTTTCGGGGGAGTTCGAGGTTCCGGGACAACCCCGAGTGGCCGGTGTATCGCCGACGAGCCAGGGCGGCGATAATATGCAGATTCTGGAGGGCTCGCCGTCGTCGATGGCGTCGAACGGAGTTTCGAGTATGCAGAGTAGTGTGATTTTGGGGTCTAAGTATTTGAAGGCGGCGCAAGAGCTTCTGGATGAGGTCGTGAGTGTGGGGAAGGGGAATCAGCAAGGGGGGACGATAGAGATGGAGGGAGGTCGTAATAAAGAGAAGATGAAAGGGAATAGATCAGAATCAGAATGTGGAGGGAATAATAATATTGATGATGGTGGTTCAAGCGGTGGCCATAATAAGCAAGCGGCTGAACTCAGCACCGCCCATAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTTTCCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTATCGGCACCAAATGCAGACGGTGATATCGTCGTTCGAGCAAGTGGCGGGATACGGTGCAGCCAAATCATACACAGCACTGGCACTGAAGACGATATCTAAGCAGTTTCGGTGTCTGAAAGATGCAATAAGTTCGCAGATAAAAGCGACGAGCAAGACACTGGGAGAGGAGGATTGCTTGGGAGTGAAGGTAGAAGGTTGTCGGCTACGCTATGTGGACCACCATCTCCGGCAACAGAGGGCTCTGCAGCAGCTGGGAATGATGCACCAAAATGCCTGGAGGCCTCAGAGAGGCTTGCCTGAACGGGCTGTCTCCATTCTTCGTGCTTGGCTTTTCGAGCATTTCCTTCACCCCTATCCTAAGGACTCAGATAAAGTTTTGCTTGCTAAACAAACTGGACTGACTCGGAGCCAGGTGTCTAACTGGTTTATAAATGCGCGAGTTCGGTTATGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAACCAAGGAGCAAGAGCAGAACAATGGGTCCTCCAACTCCAAGGACAACACAAATAGATCATTGAAAGAATCAACCAGCAAGGGGGCAAACATAAATGCTGCGTCGCTTGAAGAATCACCTGGTCCCATCAATATCAGATCATTCGATGATCAGATCAAAGCTCTCCAATCAAAAACAGATCAAACCTTCAACATCAACCAAACCGAAATCTCAAACTCTCCCATTGGAGTTTCATCTGTACACCACTCTAGTAATCATCTTTCAGTGGACGTGGAAATGAAGCCCCGAGATATTAAAGATGCTTATAATAACCAGTTAATTGGTGGTGGTGGTGGTGGGGGCTATGTAGGATTCTCCTTGCAAGACATTGGGAGGTTTAACGTTAATAATGTGTCTGATCAGCAACTGGCTCCGAGGTTTCATGGGAATGGTGTTTCTCTCACTTTGGGACTCCCACATAGTGACAACCTTCCTCTCTCTGCCACCCAACATGGCTTTCTCTCTCACAATATGCATTTGGGAACTAATGGTAATGGATCTGAGTTTTGTGCTATCAACAATAGTCCTCATCCTCCTCCATCCCCTCATTCAGGCACCACCACCACTTATGAGAATATTGGGATTCAGAACAGAAAGAGTTTCGCTGCTCAGTTATTGCCAGATTTCGTCACTTGA 2106 0.5019 MASTYYHGGNSEIQSSADGLQTLYLMNPTYVPYSDTTNHPTTPNMFLLNPSTTPHAGHALNLPNLPHAPSPSHHNHALLGLIPPNILGSNNHTDITAFHGISTTAPRLNYNLWGSSSVIDHQTPSSPAAAATPSSSSGGAAASGFQRPSQQSLSLSLSSQQTAYNRSFSGEFEVPGQPRVAGVSPTSQGGDNMQILEGSPSSMASNGVSSMQSSVILGSKYLKAAQELLDEVVSVGKGNQQGGTIEMEGGRNKEKMKGNRSESECGGNNNIDDGGSSGGHNKQAAELSTAHRQELQMKKSKLVSMLDEVEQRYRQYRHQMQTVISSFEQVAGYGAAKSYTALALKTISKQFRCLKDAISSQIKATSKTLGEEDCLGVKVEGCRLRYVDHHLRQQRALQQLGMMHQNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVLLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQEQNNGSSNSKDNTNRSLKESTSKGANINAASLEESPGPINIRSFDDQIKALQSKTDQTFNINQTEISNSPIGVSSVHHSSNHLSVDVEMKPRDIKDAYNNQLIGGGGGGGYVGFSLQDIGRFNVNNVSDQQLAPRFHGNGVSLTLGLPHSDNLPLSATQHGFLSHNMHLGTNGNGSEFCAINNSPHPPPSPHSGTTTTYENIGIQNRKSFAAQLLPDFVT 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3475 701 SMART prehox3 210 360 IPR006563 -
Bisa02g3475 701 MobiDBLite consensus disorder prediction 121 196 - -
Bisa02g3475 701 MobiDBLite consensus disorder prediction 477 519 - -
Bisa02g3475 701 ProSiteProfiles 'Homeobox' domain profile. 405 468 IPR001356 GO:0003677
Bisa02g3475 701 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 136 491 - -
Bisa02g3475 701 SMART HOX_1 408 472 IPR001356 GO:0003677
Bisa02g3475 701 MobiDBLite consensus disorder prediction 480 510 - -
Bisa02g3475 701 MobiDBLite consensus disorder prediction 240 291 - -
Bisa02g3475 701 SUPERFAMILY Homeodomain-like 409 474 IPR009057 -
Bisa02g3475 701 FunFam BEL1-like homeodomain protein 9 411 473 - -
Bisa02g3475 701 Coils Coil 292 326 - -
Bisa02g3475 701 Pfam Homeobox KN domain 425 464 IPR008422 GO:0003677|GO:0006355
Bisa02g3475 701 MobiDBLite consensus disorder prediction 121 168 - -
Bisa02g3475 701 Pfam Associated with HOX 215 359 IPR006563 -
Bisa02g3475 701 Gene3D - 411 491 - -
Bisa02g3475 701 MobiDBLite consensus disorder prediction 262 290 - -
Bisa02g3475 701 CDD homeodomain 408 469 IPR001356 GO:0003677
Bisa02g3475 701 MobiDBLite consensus disorder prediction 181 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3475 Bisa-ChrBisa02 86208911 86212900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3475 3 700 Homeobox Transcription Factor Family AT2G35940 42.610 3.39e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa02g3475 POX 1.5e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1037 12 16788317 16791620 Bisa02g3475 02 86208911 86212900 CCT