Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3454 ATGTCAATGGAAATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCAGTTTACTGACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGCTATCAGTGAACATGGGTGCTTCACTTCAACCTCTTCCTCCCCATCAAGACCCTCATCAGTCACAGAAACAGCATGTGAGTTTTGAGGAAACAAGCAACAAGGAACTGGGATCATCTTCAAAATGCCACAAATTAACTCCATTTGAGTCTGTGGAGCATGAACAACCCAGGATTCCTCCGGTTCGCCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGATTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCATAGAGAGGCTTTTAGCACAGCAGCAAAAAACTGGGCACATTTCCCTCACATTCACTTTGGTCTAAAGCTGGATGGAAACAAGCAGGCAAAGTTGGACCATCAGGGTGAGGGAACTCAAAAGTCTAATGGATTCTATTGA 558 0.4427 MSMEMMATERVCYVHCNFCNTILAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQPLPPHQDPHQSQKQHVSFEETSNKELGSSSKCHKLTPFESVEHEQPRIPPVRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDHQGEGTQKSNGFY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3454 185 CDD HMG-box_SF 115 151 - -
Bisa02g3454 185 SUPERFAMILY HMG-box 103 154 IPR036910 -
Bisa02g3454 185 MobiDBLite consensus disorder prediction 92 110 - -
Bisa02g3454 185 FunFam Axial regulator YABBY 106 176 - -
Bisa02g3454 185 MobiDBLite consensus disorder prediction 77 91 - -
Bisa02g3454 185 Gene3D High mobility group box domain 99 158 IPR036910 -
Bisa02g3454 185 Pfam YABBY protein 7 161 IPR006780 GO:0007275
Bisa02g3454 185 MobiDBLite consensus disorder prediction 57 116 - -
Bisa02g3454 185 PANTHER PROTEIN YABBY 6-RELATED 1 171 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3454 Bisa-ChrBisa02 85780352 85786580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3454 1 185 C2C2-YABBY Transcription Factor Family AT1G08465 64.894 3.42e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa02g3454 YABBY 6.2e-73 CL0114