Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3449 ATGGAGGGTCCAGTGATGGAAGAGAGTAAGAAGCCTGAGGCACATTTGACTTCGGCAGCGGCTTTTGTGGAGGGTGGAATCCAGGACGCTTGTGATGATGCTTGCAGCATATGTCTTGAAGAATTCTGTGATAGCGATCCTTCAACGGTGACAAGTTGCAAGCATGAGTTTCATCTTCAATGCATTTTGGAATGGTGTCAGAGAAGCTCCCAGTGTCCCATGTGTTGGCAACCCATTAGTCTTAAAGATCCAACCAGCCAGGAATTGCTTGAGGCAGTGGAAAGAGAGAGGAACTTTAGGTTCACACCATCTAGAAATGCCACAATATTTCATCATCCAACTCTTGGGGATTTTGAGTTGCAACATTTGCCAGTTGGTGCTAATGATGCTGATCTTGAAGAGCGCATTATCCAACACTTGGCTGCTGCTGCTGCAATGGGGCGAGCACGTCACATTGCTAGAAGGGAAGGCCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCACAGTTCTTGGTATTTTCAACTCATTCTAATACACCTCCTGTGGCTCCGGCTTCTTCCTCTCCAACTCTAAGGGAAAATGGTGAACCAACTCCTGCAAACACAATATCCACTCTATCACCCACACATACAATTGTAGAAGAATCATCGCTGCCAACTCCGGTTCCTCCTATTCAACCTAACCAAGTTTCTGCTTCAGGGTCAGGATCTACTGCTTTTGTTGCTAATCACCAAGTATCATCTTGCAACCATAGATCTAGTCAGTCATCCCCAACACCTAGTGGCCAAGACAGAGCTGGACCATCAGAATTCCAATCATTTTCAGAATCTCTGAAGTCTAGGCTAAACGCAATGTCGATGAGATACAGAGAATCAATTTCCAAGAGCACTAGAGGGTGGAAGGAGAGATGGTTCTCTCGCAACTCTTCCATGTCTGATATGGGATCTGAAGTAAGACCAGAGGATCAAATGACCAGCATATAG 984 0.4604 MEGPVMEESKKPEAHLTSAAAFVEGGIQDACDDACSICLEEFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFTPSRNATIFHHPTLGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQFLVFSTHSNTPPVAPASSSPTLRENGEPTPANTISTLSPTHTIVEESSLPTPVPPIQPNQVSASGSGSTAFVANHQVSSCNHRSSQSSPTPSGQDRAGPSEFQSFSESLKSRLNAMSMRYRESISKSTRGWKERWFSRNSSMSDMGSEVRPEDQMTSI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3449 327 MobiDBLite consensus disorder prediction 173 216 - -
Bisa02g3449 327 MobiDBLite consensus disorder prediction 173 275 - -
Bisa02g3449 327 Pfam Ring finger domain 34 75 IPR001841 -
Bisa02g3449 327 SMART ring_2 35 75 IPR001841 -
Bisa02g3449 327 SUPERFAMILY RING/U-box 28 83 - -
Bisa02g3449 327 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 19 84 - -
Bisa02g3449 327 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Bisa02g3449 327 MobiDBLite consensus disorder prediction 227 275 - -
Bisa02g3449 327 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Bisa02g3449 327 MobiDBLite consensus disorder prediction 291 327 - -
Bisa02g3449 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 84 IPR013083 -
Bisa02g3449 327 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3449 Bisa-ChrBisa02 85668679 85671897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3449 32 75 C3H Transcription Factor Family AT5G15790 52.273 2.06e-11 61.2