Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3447 ATGTTTAACGCTATGATGGATCCTGAGTTGATGAGAATTGCCCAGGAGCAGATGGGTCGCATGTCACCCGACGAGTTGGCTCGGATTCAACAACAGATGATGTCTAATCCAGAATTAATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGGCCTGAAGACTTCAAACTTGCTGCGGAGCAGTTAAAGCATACCCGTCCAGAACAGATGGCTGAGATTGGTGAGAAGATGGCTAATGCAACACCTGAAGAAATTGCAGCTATTCGTGCCCGTGCTGATGCCCAGGTCAAATATGAATTAAATGCAGCTGAGATGTTGAAGAAGCAGGGAAATGAACTTCACAATCAAGGAAAGTACAATGAGGCCATGCAGAAGTATTCTCTTGCTAAGAAAAACATTAAAGAAATTCCATCTTCCCAAAGTAGAAAGCTTCTCTTGGCATGCTCGCTCAACTTGATGTCTTGTTACTTGAAGATAAAGCAGTATGATGAATGCATTAAAGAAGGTTCTGAGGTTTTGGCATATGATGCAAAGAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGTCTACTGAAGGATGCTGTTAATGACTTGAGCATGGCATATGAAGTTAGCCCTGATGATGATACAATTGCGGAGCTTTTAAGGGAGACCAAGGAAATGTTGGCTAAGGAAGATAGTCAGCATGCACCAAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGTTGAGAATCTGTCTTCTGGAAACTTTGGAAGCTCATCTGTGGAGCAAACAGTGACTCAACCAAAAAAATCCAATGACTCTTCTAAGAGTTGCAGTACAGTCAACAACGGACATTTGAAAACAGATGTGGAAAGTTTAGATAAACTGAAAAATGACCCAGAAGCTATCAGATCATTCCAAAATTTCATGTCAAATGCTGACCCTGCAACTCTGGCTTCTTTGAACGGCGGACAATCCAGCGATATGTCTCCTGATATGATTAGAACTGCCTCAAATATGATTAGCAAGATGCCACCTGAGGAACTTCAAAAACTGTTTGACATGGCTTCTTCATTTCAGGGGGACAACCCATTTTTAAGAAGGGGTTCCCCTGATTCTACTTTCAACCCTGGATCAGTTCCTCCCAATGTGACACCTGAGATGTTTAAAACAGCTTCTGATATGATAAATAAAATGCCACCCGAGGAGCTTCAGAAGATGTTTGAAATGGCATCCTCCTTTACAGGGAAAGCATCTGCAGACGGGGACAAGAATGTGAGAAATGCTTCTCAGTCAAATGTCCCCTTCTCAAGCACCAGCAGAAGTAATGCTTTTGGTCAATCTAGTTCTTCCCTTGATTCATTTATGAGAAATGCTTCTCAGCCAAACTTCCCATCCTCAAGCACTGATTTGCAAGAACAAATGAGAAATCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACGTCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGTGAACAATTTGGTTTCAAGCTTTCACAAGAAGAGGCAGCAAAAGCTCGAGATGCCATGTCATCCTTGTCACCGGAGGCCTTGGATAAAATGATGCGATGGGCTGATCGGCTTCAAAGAGGAGTTGAAGGTGTAAAAAAGACAAAGAACTGGCTGCTAGGGAAACCTGGTATGATATTTGCAATAGTCATGCTCATTTTGGCTGTAATTCTTCACCGGCTGGGCTTCATTGGTGGCTAG 1749 0.422 MFNAMMDPELMRIAQEQMGRMSPDELARIQQQMMSNPELMRMASESMKNMRPEDFKLAAEQLKHTRPEQMAEIGEKMANATPEEIAAIRARADAQVKYELNAAEMLKKQGNELHNQGKYNEAMQKYSLAKKNIKEIPSSQSRKLLLACSLNLMSCYLKIKQYDECIKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVNDLSMAYEVSPDDDTIAELLRETKEMLAKEDSQHAPRGLVIEEITEEVENLSSGNFGSSSVEQTVTQPKKSNDSSKSCSTVNNGHLKTDVESLDKLKNDPEAIRSFQNFMSNADPATLASLNGGQSSDMSPDMIRTASNMISKMPPEELQKLFDMASSFQGDNPFLRRGSPDSTFNPGSVPPNVTPEMFKTASDMINKMPPEELQKMFEMASSFTGKASADGDKNVRNASQSNVPFSSTSRSNAFGQSSSSLDSFMRNASQPNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGFKLSQEEAAKARDAMSSLSPEALDKMMRWADRLQRGVEGVKKTKNWLLGKPGMIFAIVMLILAVILHRLGFIGG 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3447 582 MobiDBLite consensus disorder prediction 416 472 - -
Bisa02g3447 582 Gene3D Tetratricopeptide repeat domain 89 235 IPR011990 GO:0005515
Bisa02g3447 582 MobiDBLite consensus disorder prediction 251 284 - -
Bisa02g3447 582 SMART tpr_5 180 213 IPR019734 GO:0005515
Bisa02g3447 582 SMART tpr_5 103 136 IPR019734 GO:0005515
Bisa02g3447 582 SMART tpr_5 146 179 IPR019734 GO:0005515
Bisa02g3447 582 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 363 - -
Bisa02g3447 582 MobiDBLite consensus disorder prediction 424 472 - -
Bisa02g3447 582 SUPERFAMILY TPR-like 96 228 IPR011990 GO:0005515
Bisa02g3447 582 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3447 Bisa-ChrBisa02 85644797 85650581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3447 100 235 Calmodulin-binding Proteins AT5G48570 34.507 1.32e-15 78.2