LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g3432	ATGGCCAGAGGGGGTGGACTCTCCATTGATTCAGATCCACTCGGGAGCTTCTTCTTCCCCAATCACCCTGTGGTTCTCAACTCTTTTCCTTCTGAAGACGCGCTTCAGCCCACCTGCAAACTTGGCTCCATGGACACTTCGATTCCGTTTATGCTCAGAAGAACCACCGATGAGAGGGACTTCTTCTCTAACAACAATGACAGGGCTTCCTCTGCCTCTGCCAACGCTCATACCACATCCACATCTCCAACTGTGATTGAATATCAAGTAAACACTGGTCTGAATCTCTTAACTACCAGCAGTGACCAAGGCATATCTTCTGATTTTGAAGATAAAAGAGCAAAGAGTGAGGTGGCTGTTCTTCAAGCTGAGGTGGAGAGAATGAAGGGGGAGAATCATCGGCTGAGGGACATGCTTGAGCAGGTAAACGGCAGTTACAACGCGCTGAAGATGCATATGATGAACTTGATGCAGGATCAGAAGGGGAGTGAGGAGGTTGAAGAACGTGAACACGAGGTGTTTGATGAAAGTTCAAAAGGAAAGAAACAAACTGGGAGTAGCAGAGGAGGCTTAGTGCCGAGGCAATTCATAGATCTCGGGTTGGCTTCTATTGATAATGGTGAGACTGACAGTGATGAGGCTGAGGGTGAGGCTGATGCTTCACTTTCTTCATCAGTGGGAAGAAGCCATGACAGGTCAGGATCACCAGGAAACAATGTGGAAGTGGCTTCCAAAGAATTTGCTGCCAGAATTGATCAAGATAAGAAGAAATATGGTAAGGGAACTGAAGTAGAAGAAGATGCTGATCAGATTCCAAAGTTCAGTCCTCCAAAGAATGTTGATGAACAAGTGGAGGCCACTATGAGGAAGGCAAGAGTTTCAGTCAGAGCTCGATCGGAGGCAGCCATGATCACTGATGGATGTCAATGGCGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGCCCTCGTGCTTATTATCGCTGCACCATGGCTCCAGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCGGAGGACAAATCAATCCTAGTAACAACATACGAAGGGAACCACAACCACGCCTTGCCGCCGGCGGCGATGGCGATGGCTCAGACGACGTCATCGGCGGCGAAGATGCTACTCTCAGGATCAATGTCGAGCAACGATGGGCTAATGAACGCGAGTTTCCTTGCAAGAACACTGCTTCCATGCTCTTCAAGCACCATGGCCACAATCTCAGCCTCAGCTCCATTCCCAACTGTTACATTGGACTTAACTCACTCCCCACCTACAAACCACCCTCCCACACAGTTACAAATGCCCTTCACAAATAATAATGGCCCTCACAGTTTTGCTCAGCTCTTGGGTCAGGTTCTGTTTGATAATCGTTCTAAGTTTTCTGGGCTTCAGATTGATCATAAGGACCCTTCACAGTTGGGCGCTGCCATAGCCGCTGACCCAAATTTCACTGCGGCTATAGCGGCGGCTGTTGCTTCCGTCATGGGAGGTGCTTTGCCTAACATTAATGGGAATAATAATAGTAGCAACCTCATCGCTGCCACCGATAGTAATGGCAATGTTACAAGTAGCAACACTAATAATAGCAACGGAAATGGAAGCAGCAAAATCAGCAATAATTCGAATTTCTCAGGGAACGAGCTTAGTTGA	1674	0.4785	MARGGGLSIDSDPLGSFFFPNHPVVLNSFPSEDALQPTCKLGSMDTSIPFMLRRTTDERDFFSNNNDRASSASANAHTTSTSPTVIEYQVNTGLNLLTTSSDQGISSDFEDKRAKSEVAVLQAEVERMKGENHRLRDMLEQVNGSYNALKMHMMNLMQDQKGSEEVEEREHEVFDESSKGKKQTGSSRGGLVPRQFIDLGLASIDNGETDSDEAEGEADASLSSSVGRSHDRSGSPGNNVEVASKEFAARIDQDKKKYGKGTEVEEDADQIPKFSPPKNVDEQVEATMRKARVSVRARSEAAMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAPGCPVRKQVQRCAEDKSILVTTYEGNHNHALPPAAMAMAQTTSSAAKMLLSGSMSSNDGLMNASFLARTLLPCSSSTMATISASAPFPTVTLDLTHSPPTNHPPTQLQMPFTNNNGPHSFAQLLGQVLFDNRSKFSGLQIDHKDPSQLGAAIAADPNFTAAIAAAVASVMGGALPNINGNNNSSNLIAATDSNGNVTSSNTNNSNGNGSSKISNNSNFSGNELS	557

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	61	80	-	-
	Bisa02g3432	557	Pfam	WRKY DNA -binding domain	306	362	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	158	192	-	-
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	161	182	-	-
	Bisa02g3432	557	ProSiteProfiles	WRKY domain profile.	299	365	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g3432	557	Coils	Coil	111	138	-	-
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	247	272	-	-
	Bisa02g3432	557	Gene3D	WRKY domain	289	366	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g3432	557	FunFam	probable WRKY transcription factor 31	289	366	-	-
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	65	80	-	-
	Bisa02g3432	557	SUPERFAMILY	WRKY DNA-binding domain	297	365	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g3432	557	SMART	WRKY_cls	304	364	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	222	240	-	-
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	521	557	-	-
	Bisa02g3432	557	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	102	519	IPR044810	GO:0003700
	Bisa02g3432	557	MobiDBLite	consensus disorder prediction	204	280	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g3432	Bisa-ChrBisa02	85283024	85285891	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g3432	53	505	WRKY Transcription Factor Family	AT1G62300	47.870	2.28e-121	367

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa02g3432		WRKY	2e-24	CL0274

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa12g1009	12	16219351	16221645	Bisa02g3432	02	85283024	85285891	CCT
	Bisa02g3432	02	85283024	85285891	Bisa02g3432	02	85283024	85285891	ECH