Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3430 ATGGAATGGAGCAGAGGCCACACCTTAGGCCACGGCTCCTCCGCCACCGTCTCCCTGGCCAGCTCCCTCCACTCCGGAGACCTCTTCGCCGTCAAGTCATCGGAGCTGTCCCTCTCGGAGTCCTTACAGAGAGAGCAGAGGCTCCTATCTTCTCTGTCCTCTCCTTTCATAGTCAGCTACAATGGGTGTGACATAACTAGAGAGAATGAAAAGCTTTTTTACAATCTCTTCTTGGAGTATATGCCCTTTGGGTCAATTCTTCAAGCAGTTCACCGCCGAGGCGGCGGGCTCGACGCGCTGGTCATCGCGAACAACACACGGCAGGTTTTGAAGGGGCTGGAGTATTTACATTCAAATGGGTTGGTGCATTGCGACATCAAGAGCTCCAACATACTGATCGGTGAAGGTGGAGCGAAAATTTCGGACTTTGGATGTGCCAAGCGGAGTGGGGAGACAGCGGCGCCGATCAGTGGGACGCCGATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAAGAACAGGGGTATGCTAGTGATATATGGGCACTTGGGTGCACCGTGATCGAAATGGCCTCTGGGGTTTCGCCGTGGCCGAATGCGGCGGACCCATTTTCAGTTCTTCACCGGATTGCCTGCTCCGGCGAGTCGCCGGAGATTCCTGGGTTTCTGTCGGAGGAAGCAAAGGATTTCCTGGGGAATTGCCTAAGGAGGAATCCGAAGGAGAGATGGACAGCTACTCAACTGTTAAAGCATCCATTCCTCGAGGAATTCAATTTCGAGTCCAATGGGAAGGAAATTCAAAAACCCATTTCGAGTTCCCCCACAAGCATTCTTGAACACGGATTCTGGAATTCCATGGAGGAATCTGAGACCCGTGGAGATTCGATTCGTACGAGGTTTGAAGATTCTGCAGCTGATAGGATCAGAGGGCTAGCTGAGTTTTCAGGGGAACCCAGCTGGGAATGGGACGAGAATTGGATCACAATTAGACGGAAGATTGAATCTGATGCATCGTCGAGCAGTTTTAGAAGTAGAGATAGTGAGTGTGTTTATGAAGATTACAAATGTAGGGAAATTAGCGATGTGATAGTTAGTGTTCACAATTTTGAGAGAGGCCTTCAGAAGATGCTAACTTCTCCCTTCAATGTCAGTTTTTTTATGATTTAA 1164 0.5052 MEWSRGHTLGHGSSATVSLASSLHSGDLFAVKSSELSLSESLQREQRLLSSLSSPFIVSYNGCDITRENEKLFYNLFLEYMPFGSILQAVHRRGGGLDALVIANNTRQVLKGLEYLHSNGLVHCDIKSSNILIGEGGAKISDFGCAKRSGETAAPISGTPMFMAPEVARGEEQGYASDIWALGCTVIEMASGVSPWPNAADPFSVLHRIACSGESPEIPGFLSEEAKDFLGNCLRRNPKERWTATQLLKHPFLEEFNFESNGKEIQKPISSSPTSILEHGFWNSMEESETRGDSIRTRFEDSAADRIRGLAEFSGEPSWEWDENWITIRRKIESDASSSSFRSRDSECVYEDYKCREISDVIVSVHNFERGLQKMLTSPFNVSFFMI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3430 387 Gene3D Transferase(Phosphotransferase) domain 1 2 312 - -
Bisa02g3430 387 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3430 387 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 344 - -
Bisa02g3430 387 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3430 387 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
Bisa02g3430 387 CDD STKc_MAPKKK 2 253 - -
Bisa02g3430 387 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Bisa02g3430 387 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bisa02g3430 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bisa02g3430 387 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3430 Bisa-ChrBisa02 85264663 85265826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3430 3 333 MAP Kinase Kinase Kinase AT5G55090 50.000 1.03e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa02g3430 Pkinase 8.9e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1008 12 16204654 16205868 Bisa02g3430 02 85264663 85265826 CCT
Bisa02g3430 02 85264663 85265826 Bisa02g3430 02 85264663 85265826 ECH