Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3416 ATGCCGAGAATGATCAACGGCGATGCTGCTGAAGAGTTGGCAGAAATTAACGTTGTTGAGGCGTCGAGAGATGGCAGCGGCGGCCAGGAGAAACAGAACATGAAGAAAGGGCCGTGGACGGCGGCGGAAGACGCGATTTTGATAGAGTACGTGAAGAAGTACGGCGAAGGGAATTGGAACTCTGTACAGAGGAATTCTGGGTTGTCCAGGTGCGGCAAAAGTTGCAGACTCCGATGGGCCAACCATCTCCGGCCCAATCTCAAGAAAGGTGCTTTCTCTCAGGAAGAAGAGCAGATCATCATCGAGCTTCACGCCAAGCTCGGAAACAAATGGGCTCGCATGGCCTCCCAGGTATACATATCTATATACAAATCATTTTCATGTGCATGCCTTTTTTGTGCTAGGAACGAAGCTGATCTTTGGTTGCCTTATTCTGTCTCTGAGACTGATATGTTATTGTTTGATTTCAGATGA 474 0.4852 MPRMINGDAAEELAEINVVEASRDGSGGQEKQNMKKGPWTAAEDAILIEYVKKYGEGNWNSVQRNSGLSRCGKSCRLRWANHLRPNLKKGAFSQEEEQIIIELHAKLGNKWARMASQVYISIYKSFSCACLFCARNEADLWLPYSVSETDMLLFDFR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3416 157 FunFam MYB-related transcription factor 35 88 - -
Bisa02g3416 157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 87 IPR017930 -
Bisa02g3416 157 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 23 117 - -
Bisa02g3416 157 Gene3D - 88 139 - -
Bisa02g3416 157 CDD SANT 38 83 IPR001005 -
Bisa02g3416 157 Pfam Myb-like DNA-binding domain 39 98 - -
Bisa02g3416 157 SMART sant 35 85 IPR001005 -
Bisa02g3416 157 SMART sant 88 132 IPR001005 -
Bisa02g3416 157 ProSiteProfiles Myb-like domain profile. 84 125 IPR001005 -
Bisa02g3416 157 SUPERFAMILY Homeodomain-like 37 113 IPR009057 -
Bisa02g3416 157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 118 IPR017930 -
Bisa02g3416 157 Gene3D - 28 87 - -
Bisa02g3416 157 ProSiteProfiles Myb-like domain profile. 31 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3416 Bisa-ChrBisa02 85077520 85077993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3416 32 118 MYB Transcription Factor Family AT2G32460 79.310 6.64e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3416 Myb_DNA-bind_6 6.3e-16 CL0123