Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3402 ATGAAGAAGCTCATTATTTTCCACCTTGTGATTTGGATATGGGTATACCTGAGTGGTTTTGCTAACTGCCAAAGGCCTCCTGCTACTGTAACCATCGCTGCAGTTTTCACTTTCGATTCTGTCATAGGTAAAGCTGCAGAGGCTGCGATGAAAATGGCCGTTTCTGACGTCAATGCAGACCTCACAATTCTCAATGAGACTAAGCTGAAGTTGATAATGGAGGATGCAAATTGCAGCGCCTTCTTGGGATCCATCAGAGCTTTTCGGGTACTTGAAGAAGGAGTTACAGCTATAATAGGCCCAGATTCATCTTCCATAGCTTATATAATTTCTCAAATTGCTAATGGTCTCCAAGTGCCTCTAATTTCATATGCTGCCACTGATCCAACACTTTCCTCACTCCAGTTTCCTTTCTTCTTTCGAACTGTACAAAATGACTCTGTGCAAATGGCTGCAATGGCTGATCTGATAGACTTTCATGGATGGAAAGAGGTGATTGCTGTCTTCCTGGATGATGATCATGGAAGAAATGGAATATCAGCTTTGGGTGATGAACTTGCAAAAAGGAGAATGAAAAGTTTTCATAAATTACCTCTGAGTGTTCATTTTGATGTGAATGAAATCACCCACTTGCTCAATCAATCCAAAGTGCTTGTCCCTCGTGTCTATGTCGTTCACCTTAGTATGGATTCGAGATTGAGATTTTTCACCATAGCCCATAAGCTTCAAATGATGAACCAAGACTATGTCTGGCTTACTACAGATTGGCTGTCTGCAACTCTAGATTCAATTTCTCCCTTAAATATAAATGCCTCTCTTAGTTTCCTTCAAGGAGTTGTTGGGCTTAGACCACACATTCCAGATTCCGGCAAAAAGAGAGCTTTTGTTTCTAGGTGGAAGAAAATGCAGAAAGAAGGTGAAGCAAGTAGTGGCTTGAACTTGAATGTCTACGCGTTTTATGCTTATGATACAATCTGGGCAGCTGCAAGTTCAATTGATAAGTTCATTAAAGCGCACAGAAACATTTCATTTTCATCCAATGATAACCATAAAAATAAAACAGAAGCGGCTAGTATTAAGCTTGACAAGCTCAAAGTTTTCACTGGTGGATCTCACCTTGTAGAAATATTACTACAGTCAAATTTTACTGGTGTGAGTGGCCAAGTGCAGTTTAAATCAGACGGGAACATCATAAGTAGTGGTTATGAAGTTATTAATGTGAATAAGATGGGAATTACAAGGGTCGGTTATTGGTCTGGGTTTTCAGGATTGTCAGTTGTACCTCCTGAAAACCTTAAAAAGAAAAATGGCGATTTTTACCAAAATCAGAAGCTTAGAAATATTATTTGGCCTGGCGGAAGGACAGGAAGGCCACGTGGCTGGGTGATTGCTGATAATGAAAGACCACTGAGAATTGGAGTGCCTAAGAGAGCAAGTTTTGTTGAATTTGTCACTGAACTACCTGATACTCATCAAATTCAAGGGTACTGCATTGATGTCTTTAAGAAAGCACTGGAATTCATACCATATGATATTTCTTATGTGTTTGAGCCTTTTGGGGATGGTGTTTCAAATCCCAATTATGATGCACTTGTGAAAATGGTTGCTGACAACGTATACGATGCAGTTGTTGGAGATATTGCAATAGCACCGAACCGAATGAAAATGGTGGATTTTTCTCAGCCTTTTGCAACAACTGGCCTCGTGATAGTGGCTCCAGTGGAAATAGCAAATTCAAGTGCTTGGGTGTTTCTTAAACCATTCACAGCAGATATGTGGTGTGCCATTGCAGCTTCGTTTGTGATAATTGGAGTGGTTATACGGATTCTTGAGCACCGTGTTAATGAAGATTTCCGAGGTCCTCCTAGAAGACAACTTGCAACGATGTTTATGTTTAGCCTCTCAACACCGTTTAAGGCAAATAAGGAAAAGACAGTAAGCGCACTTGGTAGAATGGTGATGATAACATGGCTTTTCCTATTGATGGTGATCACATCTAGCTACACAGCAAGCTTGACATCGATTCTCACCCTGGAACAACTTTCATCACCCATCACAGGGATTGATAGCTTGATTAGAAGCAACTGGCCCATAGGGTTCCAAGTAGGTTCATTTGCTTACAACTACCTCACACAGAGTCTGTTCATACGCAGATCAAGACTTGTTCCCTTGGGCTCCCCTGAGGAATATGCAAGAGCTCTGAAGCAAGGGCCTTCTGGTGGAGGAGTTGCAGCCATCATAGATGAGCTTCCATATGTGGAGTTGTTTCTCTCATCTCAAACTGATTTTGGTATTATTGGACAGCCATTTACCAGGAGCACCTGGGGATTTGCTTTCCAAAAAGAATCTCCTTTTGCCATTGACATGTCAACGGCACTCCTGAAACTTGCTGAGAATGGAGAGCTTCAGAAGATTCGTGAGAAGTGGTTATGCAAGATGGGCTGTCCTGAAGAGAGAAGCAGCTCTTGGCACTACCAGCTTCACATTCTCAGCTTCTGGGGCCTCTTTCTCCTGTGTGCTCTTCTGTCTCTCTCTGCCCTTTTGGTGTTTCTGCTTAGAACAATTTCCCAATATGTCCGTTATGATAAACAAAGGCAAACCCATACTCCTTCCTCATCCTCACAACCAGCCAGTTGCAGCCATTGTCCTCATGCTGTACATCGCTTTTTTGACTTCCTTGATGAGAAGGAAGAGCCCGTCAACAAGATTTTCACTCAACCTCACAACCCAACCACAAGCACCAGCTCATAA 2751 0.4202 MKKLIIFHLVIWIWVYLSGFANCQRPPATVTIAAVFTFDSVIGKAAEAAMKMAVSDVNADLTILNETKLKLIMEDANCSAFLGSIRAFRVLEEGVTAIIGPDSSSIAYIISQIANGLQVPLISYAATDPTLSSLQFPFFFRTVQNDSVQMAAMADLIDFHGWKEVIAVFLDDDHGRNGISALGDELAKRRMKSFHKLPLSVHFDVNEITHLLNQSKVLVPRVYVVHLSMDSRLRFFTIAHKLQMMNQDYVWLTTDWLSATLDSISPLNINASLSFLQGVVGLRPHIPDSGKKRAFVSRWKKMQKEGEASSGLNLNVYAFYAYDTIWAAASSIDKFIKAHRNISFSSNDNHKNKTEAASIKLDKLKVFTGGSHLVEILLQSNFTGVSGQVQFKSDGNIISSGYEVINVNKMGITRVGYWSGFSGLSVVPPENLKKKNGDFYQNQKLRNIIWPGGRTGRPRGWVIADNERPLRIGVPKRASFVEFVTELPDTHQIQGYCIDVFKKALEFIPYDISYVFEPFGDGVSNPNYDALVKMVADNVYDAVVGDIAIAPNRMKMVDFSQPFATTGLVIVAPVEIANSSAWVFLKPFTADMWCAIAASFVIIGVVIRILEHRVNEDFRGPPRRQLATMFMFSLSTPFKANKEKTVSALGRMVMITWLFLLMVITSSYTASLTSILTLEQLSSPITGIDSLIRSNWPIGFQVGSFAYNYLTQSLFIRRSRLVPLGSPEEYARALKQGPSGGGVAAIIDELPYVELFLSSQTDFGIIGQPFTRSTWGFAFQKESPFAIDMSTALLKLAENGELQKIREKWLCKMGCPEERSSSWHYQLHILSFWGLFLLCALLSLSALLVFLLRTISQYVRYDKQRQTHTPSSSSQPASCSHCPHAVHRFFDFLDEKEEPVNKIFTQPHNPTTSTSS 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3402 916 FunFam Glutamate receptor 707 814 - -
Bisa02g3402 916 SUPERFAMILY Periplasmic binding protein-like II 448 810 - -
Bisa02g3402 916 PIRSF IGluLR_plant 1 914 IPR017103 -
Bisa02g3402 916 Gene3D - 145 424 - -
Bisa02g3402 916 FunFam Glutamate receptor 465 581 - -
Bisa02g3402 916 Pfam Ligand-gated ion channel 811 840 IPR001320 GO:0015276|GO:0016020
Bisa02g3402 916 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 866 IPR015683 -
Bisa02g3402 916 Gene3D - 742 775 - -
Bisa02g3402 916 FunFam Glutamate receptor 145 303 - -
Bisa02g3402 916 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 321 333 - -
Bisa02g3402 916 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 103 131 - -
Bisa02g3402 916 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 43 59 - -
Bisa02g3402 916 CDD GluR_Plant 468 810 - -
Bisa02g3402 916 Gene3D - 581 712 - -
Bisa02g3402 916 Pfam Receptor family ligand binding region 47 409 IPR001828 -
Bisa02g3402 916 Pfam Bacterial extracellular solute-binding proteins, family 3 471 810 IPR001638 -
Bisa02g3402 916 SUPERFAMILY Periplasmic binding protein-like I 23 461 IPR028082 -
Bisa02g3402 916 Gene3D - 47 399 - -
Bisa02g3402 916 FunFam Glutamate receptor 581 719 - -
Bisa02g3402 916 Gene3D - 467 580 - -
Bisa02g3402 916 Gene3D - 776 809 - -
Bisa02g3402 916 SMART GluR_14 469 812 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3402 Bisa-ChrBisa02 84868957 84873309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3402 22 915 Ion Channels AT2G32400 54.596 0.0 971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0986 12 15765588 15770853 Bisa02g3402 02 84868957 84873309 CCT
Bisa02g3402 02 84868957 84873309 Bisa12g0987 12 15795315 15800020 CCT
Bisa02g3402 02 84868957 84873309 Bisa02g3402 02 84868957 84873309 ECH