Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3400 ATGGGAGGGTTCAACGCCGTTCCAGGATTTTTGTTTATCAGTAATGGCTTGAGGCAAGGCCTCATGGTTATGGCTAGGATACTATTCCTCTTGGTTTTCTGCTTGTGGATTCCCACAGAAGTAGTGGGTAGGACTGGAAATACCATTGCAAATAATACTAAAGTTCCTTCAAGACCAAGTGTTGTGAAAATTGGAGCACTGTTTACTTTTAATTCATTTATTGGAAGGTCGGCTAAACCTGCAATTTTAGCTGCCATTGATGATGTTAATAATGATACAAGCATTCTTCCTGGTGTTACGATGGAAGTTATTTTAAGGGATACAAATTGCAGTGGTTTTCTTGGAACAGTGGAAGCTCTGCAGTTGATGGAGAAAGATGTGGTTGCTGCTGTTGGTCCACAGTCGTCTGGAATAGCTCATGTCATCTCTCATGTTGTCAATGAACTCCATGTACCTCTTCTGTCATTTGGGGCAACAGATCCTACTCTTTCTTCTCTGCAGTACCCATATTTTATCCGCACTACCCAGAATGACTATTTTCAGATGAATGCAATTGCAGACTTGATTGACCATTATGGTTGGAGGGAGGTAATTGCCATTTTTGTAGATGATGATAATGGAAGAAGTGGAATTTCTGCTCTGGGAGATGCCCTGGCCAAGAAACGTGCCAAGATCTCCTATAAGGCTGCCTTTACTCCTGGAGCCTCTACAAGTAATATTAGTGACCTGTTAAATGAAGTGAACTTAATGGAATCACGGGTTTATGTTCTCCATGTCAACCCTGATTCTGGTTTGACAATTTTTTCTATTGCCAAGAAGTTAGGGATGATGAGGAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTTCAGTGCTAGATGCATTAGAACCAGTTGATTCCGACACAATGGACGTCTTACAAGGGGTTATCGCATTACGCCATCACACTCCTGACACTGACCTCAAGAAGAGGTTTATCTCTAGGTTGAAAAACCTTAAAGGCAAGGAGACTGCAAACTTTAATTCTTATGCACTATATGCATATGATTCGATTTGGTTAGCAGCCCGTGCTCTTGATGCTTATCTCAATGAAGGTGGATATATATCTTTCTCCAGTGACCCCAGATTGCATGACATGAATGGAAGCATGTTGCATTTAGCATCACTTCGTACTTTTGATGGTGGCGCACAGTTTCTCCAGACAATTTTGAGGATGAACTTCACTGGTCTGAGTGGTCAAATTCAGTTTGATATGGACAAGAATTTAGTTCATCCAGCATATGATGTTTTAAACATTGGTGGATATGCACGGAGAATAGGTTTTTGGTCTAATTACTCTGGTCTGTCAGTTGTAGCTCCTGAAATCTTATATACAAAACCTCCAAATACTTCAACTAACAATCAACATCTATACGGTGTCATATGGCCAGAAGAGACTACAACTACACCAAGGGGTTGGGTATTCCCCAACAATGGAAAGCCACTACGAATAGCAGTGCCAAACCGAATAAGCTACAAGGAGTTTGTTGCCAAAGACAAGGACCCCCCAGGGGTAAAAGGTTATTGCACTGATGTCTTTGAAGCAGCCTTAAACCTGTTGCCTTATCCTGTCCCGCATCAGTATATATTATATGGAAATGGTGATAGACTTCCTAACTACGATGCACTTGTGAATGAGGTTGCACAAAATAATTTTGACGCGGCTGTTGGAGATGTTACAATTGTCACTAACAGGACAAGGATTGTGGATTTTACTCAACCTTACATGGAATCAGGGTTGGTTGTAGTTGTTCCAGTCAAGGAGGTGAAGTCAAGCCCTTGGTCATTCCTCAAGCCATTCAACGCTCAAATGTGGTGTGTCACTGGTGCTTTCTTTCTTTTTGTGGGAGCAGTAGTGTGGATTCTTGAGCACCGGCTCAATCATGAATTCCGCGGTCCACCAAGGAAACAACTCGTAACAATTTTTTGGTTTAGCTTCTCAACTATGTTTTTCTCACATAAAGAAAACACTGTGAGCACTCTGGGGCGGTTGGTGTTGTTAATTTGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACTGCTAGCTTGACATCAATCCTCACAGTGCAGCAACTATCATCCCAAATTGAAGGAATTGACAGCTTGATCTCAAGTACTCAACCTATTGGAATACAAGATGGGTCATTTGCAAGGAAGTATCTGATAAATGAGCTCAATATAGCTGAATCTAGAATCGTGACATTGAAAAACCAGCAGGATTATATTAATGCCCTTCTGCGTGGACCAAAAGACGGGGGGGTAGTGGCCGTTGTTGATGAGCTTCCTTATATTGAGATATTCATGTCCAATACCAATTGTCGGTTCAGAACTGTAGGGCAGGAGTTCACTAAAAGTGGATGGGGATTTGCATTCCAGAGGGACTCTCCCCTTGCCGTAGACATGTCAACCGCCATTCTTCAACTCTCTGAGAATGGTGACTTGCAAAAGATCCATGACAAATGGCTTTCAAAATACAGTTGTCCTGCAAAAGTCAATGATGATGATTCAAACCAACTATCTCTGAGTAGCTTCTGGGGTCTCTTTCTGATATGTGGGATAGCATGTTTCCTTGCTCTGATTGCATTCTTCGCTAGGGTGTTTTGTCAATATATGAAATTTATACCGGAGGATGAGGTGGCTGATGAGCAAATTGATCCGACCAGATCTAGAAGGACAAGCAGATCCACTAGCGTCAAGAACTTAATTGATTTTGTAGATAAAAGGGAAGCTGAAATAAAAGAGAGACTGAGGCATAGTAGTAACAAACGGCGGCGCAGCCAGAGCTTAGATAGGCATTCCAATCATTCAACCGGCTAA 2862 0.4189 MGGFNAVPGFLFISNGLRQGLMVMARILFLLVFCLWIPTEVVGRTGNTIANNTKVPSRPSVVKIGALFTFNSFIGRSAKPAILAAIDDVNNDTSILPGVTMEVILRDTNCSGFLGTVEALQLMEKDVVAAVGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTQNDYFQMNAIADLIDHYGWREVIAIFVDDDNGRSGISALGDALAKKRAKISYKAAFTPGASTSNISDLLNEVNLMESRVYVLHVNPDSGLTIFSIAKKLGMMRSGYVWIATDWLPSVLDALEPVDSDTMDVLQGVIALRHHTPDTDLKKRFISRLKNLKGKETANFNSYALYAYDSIWLAARALDAYLNEGGYISFSSDPRLHDMNGSMLHLASLRTFDGGAQFLQTILRMNFTGLSGQIQFDMDKNLVHPAYDVLNIGGYARRIGFWSNYSGLSVVAPEILYTKPPNTSTNNQHLYGVIWPEETTTTPRGWVFPNNGKPLRIAVPNRISYKEFVAKDKDPPGVKGYCTDVFEAALNLLPYPVPHQYILYGNGDRLPNYDALVNEVAQNNFDAAVGDVTIVTNRTRIVDFTQPYMESGLVVVVPVKEVKSSPWSFLKPFNAQMWCVTGAFFLFVGAVVWILEHRLNHEFRGPPRKQLVTIFWFSFSTMFFSHKENTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGIQDGSFARKYLINELNIAESRIVTLKNQQDYINALLRGPKDGGVVAVVDELPYIEIFMSNTNCRFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLSKYSCPAKVNDDDSNQLSLSSFWGLFLICGIACFLALIAFFARVFCQYMKFIPEDEVADEQIDPTRSRRTSRSTSVKNLIDFVDKREAEIKERLRHSSNKRRRSQSLDRHSNHSTG 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3400 953 PIRSF IGluLR_plant 21 953 IPR017103 -
Bisa02g3400 953 Pfam Bacterial extracellular solute-binding proteins, family 3 553 838 IPR001638 -
Bisa02g3400 953 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 348 360 - -
Bisa02g3400 953 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 75 91 - -
Bisa02g3400 953 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 135 163 - -
Bisa02g3400 953 FunFam Glutamate receptor 177 344 - -
Bisa02g3400 953 Gene3D - 81 425 - -
Bisa02g3400 953 SUPERFAMILY Periplasmic binding protein-like II 473 837 - -
Bisa02g3400 953 FunFam Glutamate receptor 607 737 - -
Bisa02g3400 953 CDD PBP1_GABAb_receptor_plant 63 453 IPR044440 -
Bisa02g3400 953 FunFam Glutamate receptor 733 841 - -
Bisa02g3400 953 Pfam Receptor family ligand binding region 79 433 IPR001828 -
Bisa02g3400 953 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 62 914 IPR015683 -
Bisa02g3400 953 Gene3D - 177 449 - -
Bisa02g3400 953 FunFam Glutamate receptor 491 607 - -
Bisa02g3400 953 Gene3D - 491 606 - -
Bisa02g3400 953 MobiDBLite consensus disorder prediction 929 953 - -
Bisa02g3400 953 CDD GluR_Plant 494 837 - -
Bisa02g3400 953 SMART GluR_14 497 839 IPR001320 GO:0015276|GO:0016020
Bisa02g3400 953 Gene3D - 607 730 - -
Bisa02g3400 953 SUPERFAMILY Periplasmic binding protein-like I 57 487 IPR028082 -
Bisa02g3400 953 Gene3D - 731 841 - -
Bisa02g3400 953 Pfam Ligand-gated ion channel 839 870 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3400 Bisa-ChrBisa02 84805449 84810549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3400 9 804 Ion Channels AT1G05200 66.998 0.0 1141