Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3392 ATGGCTGACATGGATCGCTCTTCTGATGACGTCTCTGCAGATTCTACAGAGCAATCTAGTCAAACTTCTAAGGCTGAATTTTCTGAAGATGAAGAAACCCTTATAGCCAGGATGTACAATCTGGTTGGTGAAAGGTGGCCTTTGATTGCTGGAAGAATTCCAGGAAGAACAGCAGAGGAAATAGAGAAGTACTGGAATTCAAGATACTCAACCAGCGAATAA 222 0.4234 MADMDRSSDDVSADSTEQSSQTSKAEFSEDEETLIARMYNLVGERWPLIAGRIPGRTAEEIEKYWNSRYSTSE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3392 73 Gene3D - 26 69 - -
Bisa02g3392 73 CDD SANT 26 66 IPR001005 -
Bisa02g3392 73 Pfam Myb-like DNA-binding domain 26 67 IPR001005 -
Bisa02g3392 73 SMART sant 23 71 IPR001005 -
Bisa02g3392 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 22 70 - -
Bisa02g3392 73 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Bisa02g3392 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 73 IPR017930 -
Bisa02g3392 73 MobiDBLite consensus disorder prediction 1 30 - -
Bisa02g3392 73 FunFam MYB-like transcription factor 26 68 - -
Bisa02g3392 73 SUPERFAMILY Homeodomain-like 23 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3392 Bisa-ChrBisa02 84638800 84639476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3392 19 70 MYB Transcription Factor Family AT5G14750 46.154 9.31e-15 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa02g3392 Myb_DNA-binding 9.8e-09 CL0123