Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3384 ATGAGTTTGACGAGTATGGAACCTGTGTGTGATCTTTGTGGGGTTGTAAGAGCTGTGGTATACTGCAATTCAGATTCTGCCCGTCTCTGCTTGAATTGCGATGGTTGTGTACACTCTGCCAATGCTTTGTCACGCCGGCATTCTCGTTCACTCCTGTGTGATAAGTGCAATTCCCAGCCAGCAAGTGCGCACTGCATGTATGATAAAATGTCTCTCTGTCAATCTTGTGACTGGAATCAAAATGGCTGTTCAATATTGGGACATAGGCGTCAGGCATTGAGTTCTTACACGGGCTGTCCCTCTTCGGCCGAGTTCTCAAAAATATGGTCCTCGGTTCTTGATGCTTCTTCTTCAAGTGGTCTTGATATAACTGGATGCGGATCATTTAGCACATTGCCTAAAAATGACAACATCTCCAGCAAGTGTTTGGAGCAACCAGATAGTGATAGCTCCTACGGTTTGGTAATTAGCAAGTTGAATGATATAGAACCTTTTGTCAAACATGAACCATGGATGGGGCAATCTTCTAATCTTATGCCACCAAATCTAACTTACCTATCATCGAGCAGAGATCAACCATTATTCTTTCCTCCAGACTTAGACCTCCCAAAGGGATGTCCTAATTTCAAGGATCTTGGGACATGCGATGGTGATGATCATTGTGAAGGTCTCAACCTGGATGATGCTCAATTAAACTTTGAAAGTGGTGATGAAATATTTGGTTGCTCTCAAGAAGCCACCAGATACCATCTTGAGGATGGAGAAATTGACTGTCTATTAATGGAAAAGAACATATCAGTGACAGAAACAGAATCAAATGATCTTATTGAGAATGCCATGGAGGCACCATCATCAGTTCAACAAGACCGTGCGCCTTTTCAATTCTCCAGGGCTGGGAGATCAGCTAATGTGGTACAGACCATCAACAGTAATGCAAGTTCTGCACTAATGAATTTCAGTTGCAACAAAAATATTAATCTAGGATACCCTCAGGCTCAAGTTCATTCAAGCATATCACTTTCATCATCAAACATCTCTGGCGGAAATAGTGCCATTGATTATCAAGATTGTGGGTTATCACCAGCATTCCTGACAGGTGAAACCCGGTGGGAACCAAGTTTGGAGGCCACGTGTCCACAAGCAAGGGATAAAGCTAAAATGAGATATCACGAGAAAAAGAAAACTCGGATGTTTGGTAAACAAATAAGATATGCATCTCGCAAGGCAAGAGCTGATACTAGAAAACGAGACAAAGGTAGATTTGTGAAAGCTGGTGAAGCAAGTGATTATGATCCTCAAGTGACAGGAAACTCTTAA 1317 0.4229 MSLTSMEPVCDLCGVVRAVVYCNSDSARLCLNCDGCVHSANALSRRHSRSLLCDKCNSQPASAHCMYDKMSLCQSCDWNQNGCSILGHRRQALSSYTGCPSSAEFSKIWSSVLDASSSSGLDITGCGSFSTLPKNDNISSKCLEQPDSDSSYGLVISKLNDIEPFVKHEPWMGQSSNLMPPNLTYLSSSRDQPLFFPPDLDLPKGCPNFKDLGTCDGDDHCEGLNLDDAQLNFESGDEIFGCSQEATRYHLEDGEIDCLLMEKNISVTETESNDLIENAMEAPSSVQQDRAPFQFSRAGRSANVVQTINSNASSALMNFSCNKNINLGYPQAQVHSSISLSSSNISGGNSAIDYQDCGLSPAFLTGETRWEPSLEATCPQARDKAKMRYHEKKKTRMFGKQIRYASRKARADTRKRDKGRFVKAGEASDYDPQVTGNS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3384 438 ProSiteProfiles Zinc finger B-box type profile. 5 52 IPR000315 GO:0008270
Bisa02g3384 438 SMART bboxneu5 5 52 IPR000315 GO:0008270
Bisa02g3384 438 SMART bboxneu5 53 93 IPR000315 GO:0008270
Bisa02g3384 438 MobiDBLite consensus disorder prediction 404 438 - -
Bisa02g3384 438 CDD Bbox1_BBX-like 9 52 - -
Bisa02g3384 438 MobiDBLite consensus disorder prediction 405 425 - -
Bisa02g3384 438 ProSiteProfiles Zinc finger B-box type profile. 48 93 IPR000315 GO:0008270
Bisa02g3384 438 ProSiteProfiles CCT domain profile. 382 424 IPR010402 GO:0005515
Bisa02g3384 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 427 - -
Bisa02g3384 438 Pfam CCT motif 382 424 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3384 Bisa-ChrBisa02 84484778 84486775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3384 5 432 C2C2-CO-like Transcription Factor Family AT3G21880 43.256 3.81e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa02g3384 CCT 8.6e-16 CL0281