Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3383 ATGTGCAAGGGTGCAGAAGAGGCCTTAGACGTCACTTCACATGGTGAAACCAGAGGTTCAGTGTTATGTGAGCTCTGTGGGGTGAAGGCTTCGTTGTATTGCCAAGCCGATAAGGCGTATCTATGTAGAAAATGTGACAAATGGGTTCATAAAGCCAATTTCTTGGCATTAAGGCACATTAGGTGCTTTCTCTGCTCCACATGCCAGAATCTGACCCAACGGTATCTTGTTGGAGCATCGGTCGAGGTTGTTCTTCCGACCATCGCAAGTTCGAACGGCGACGACAGGAAGTGTTCAAGATGA 303 0.4785 MCKGAEEALDVTSHGETRGSVLCELCGVKASLYCQADKAYLCRKCDKWVHKANFLALRHIRCFLCSTCQNLTQRYLVGASVEVVLPTIASSNGDDRKCSR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3383 100 CDD Bbox1_BBX-like 22 64 - -
Bisa02g3383 100 SMART bboxneu5 18 64 IPR000315 GO:0008270
Bisa02g3383 100 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 22 72 - -
Bisa02g3383 100 Pfam B-box zinc finger 22 59 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3383 Bisa-ChrBisa02 84458175 84458477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3383 1 90 C2C2-CO-like Transcription Factor Family AT3G21890 50.505 1.66e-25 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa02g3383 zf-B_box 1.9e-05 No_clan