Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3355 ATGATCTTTTCATCATTCCATTTGTCGAATCAAGTTATTGCAGATATTGTTCTCTTAAGGGAAAGGGCAAGCTTTCAATATCTGGTGGGCGGAATGGGTAGGGTGGTTGTCTGTTTGAGAAAGATCGGAAGGACAATCATCCTCAACTGGTCTGCAAATCACATGTTGCCTATCTTCATTTTGCATGCATTGTTTTTCACTCTTGTGCATTGCTCTGCTAGAGATACCATAACCCTTAACAACTTCATAAGCGATGAGAGAGGAGATACTCTTATTTCAGCTGGAGAGGTATTTGAACTAGGATTCTTCACTCCTAATGGAAGCTCAAGTAGCGGAAGATATCTGGGAATATGGTACTACCTGTCAAATCCACTTACAGTTGTGTGGGTTGCTAATCGAGATCATCCACTTCCTGATGCTGCGGGTGCTTTTGCCATTGCAGAGGATGGCAATCTCAGAGTGCTGGATGGAAGTGGGAGATCTTACTGGGGTACAAATCTTGAAAAATCATCTTCAGTGCATAGGATAGTGAAGCTAATGGATAGTGGCAACCTCATTGTAAGCGATGGAGAACAAGCAAATCACTCAGTGAAGATGCGGTGGCAGAGTTTTGCAAATCCAACAGACACATTTCTTCCGGGTATGAAAATGGATGAATGTTTGGTACTAACTTCTTGGAGAAGTTATGACGACCCAGCACCAGGAAACTTCTCATTTCGGCAAGATCAAGGAGAGAACCAATATATCATTTGGAAAAGATCTATCAGATACTGGAAAAGCAGCGTGACAAGTGCATTTTTTGCGTCAGGTGAAATGTCTGCTGCAATATCTTACTTATTGTCTAATTTCACTTTGAGAATATTCCCAAACAACTCTGTACCCTTCCTTACTTCATCACTATATGGTGGCACAAGGCTAGTTATGACATACTCGGGTCAGCTTCAGTATATGAAGATGGATTCACAGAAAGTTTGGTCCTTAGTTTGGGCAGAGCCCCGAGATAGATGTAGTGTGTATAATGCTTGTGGAAACTTTGGCACCTGCAATAGTAAGTATGATTCTATGTGCAAGTGTTTACCGGGCTTCAAGCCTAACTCTCCGGAGAGTTGGAATTTCGGTGACTTCTCAGGTGGATGCAGCAGGAAAACAACGGTGTGCAGTGAGAATGCCGAGAGTGACACGTTTTTGAGTTTAAAAATGATGAAAGTAGGGAACCCAGATGCTCAATTCAATGCTAAGAATGAAATGGAGTGCAAGCTAGAGTGCCTTAACAATTGCCAGTGCTATGCATATTCATATGAAGACCCTAGAAGTGCAACGCAGGGCGCTCGTGGTGATGCAGCGTGCTGGATTTGGTATGAGGACCTGAACAATCTGGAAGAAGAGTATGAGAATGGCTGTGATCTACATGTACGTGTGGCAGTTTCTGATATAGAGTCAACTGGGAGGAACTGTGGGACTTGTGGTACAAACTTCATTCCATATCCACTTAGCACGGGGCCAAATTGTGGTGACCCCCTGTACTCTAGTTTTCACTGCAACATTACCACAGGCGAGCTTAACTTTGAAACTCCTGCGGGCACTTATCAAGTGATAAGCATAACCCCCGAAACACGAAACTTCATGATCCACAGCAGAAACATAGTTGTTTGTGAGAGGGACAAGCTTCTGCGTTTAAATCAGTCATCTCCATTTCATCTTACTGACAAGTGCAATGCTGACCCAAGCACCGTTAATCCTATTGCCCCTGTGAAAATTGGAGAGGAAATAGAGTTGAGCTGGGATCCACCACTAGAGCCAGTTTGTTCTTATTCTTTTGACTGCAAGGACTGGCCAAATTCAATTTGCAATACCACCAGAGATGGGAAAAAGAGGTGCCTTTGCAATACAAACTTTCTTTGGGACGGCTTGAATTTAAATTGTACCATCGAAGCCAGTAATGGCTATCAAACTGGAAGGCGTTTGTCCGTTCCTCTGATTATTGCGGTCACTTCTACAACTGTGATTGTGTTAATTCTTCTGTCAAGTACTGTTACCTATGTTTACATGTGGAAGAGGAGGCTGGCCAAGACACAAGAAATCAGGGGATATGTTCAGAAAAATTCAGCCATTAATTTGTATGACAGTGAGAGACATGTTAAAGATCTGACTGACTTGGGTAGGTTCAAAGACGATGACGGACAGGCCATAGATGTCCCACATTTTCATTTGGAAAGCATACTTGGTGCTACCAGTAACTTTTCAAATGCAAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAGTTTCCAAGAGGACAAGAGATAGCAGTAAAGAGACTGTCAAGTTGCTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTTTTGATTGCCAAGCTTCAACATCGGAACCTGGTTAGGCTTCTGGGTTATTGTCTTGAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCAAATAGAAGTCTAGATTCTTTCATATTCGACCGGAAGTCATGTGTTCTATTAGATTGGAATATGCGCTTCAAGATTATTCTAGGGATTGCTCGAGGACTCCTTTACCTTCACCAAGATTCAAGATTGAGGATTATTCATAGAGACCTGAAAACAAGCAACATTCTGCTAGATGAAGAGATGAATCCTAAAATTTCAGACTTTGGCTTAGCTAGAATTTTTGGAGGAAAAGAAACAGCAGCAAACACAAATAGAGTGGTTGGAACTTATGGGTATATGTCTCCAGAATATGCACTAGATGGATTTTTTTCAGTCAAGTCTGATGTGTTCAGTTTCGGTGTGGTGGTGCTTGAGATTATCAGTGGAAAAAGGAACATCGGTTTTTACCAGTCAGATCATGAACTGAGTCTTCTGGGCTATGCATGGCATTTATGGAAAGTAGAGAGGGGACTAGATTTTATGGATCAGACATTGTCTCAAACATGCAACGCAGATGAATATTTGAAGTGTCTAACTGTTGGGCTGTTATGCGTACAAGAAGATCCAAATGACCGTCCCATAATGTCCAATGTAGTTTTCATGCTTGGAAGTGATTCCAGCACTCTTCCAACTCCCAAGCAGCCAGCCTTTGTTGTTAGGAGATGCCCTTCTAGTAGGGCTTCTACTTCCAGTAAACTGGAATCTTGTTCACATAATGATTTGACTGTCACTTTAGAAAATGGCAGGGAAAACATGGTTTCCCATGGTAATGTGAAGCAATGTGTTCGTATCGTAGAAACTCACATTGAAAGGATGGGTGGGATTGGTTTTGAAGATTTGCTGCCTGTGATGGCTGACAATCTTGGAGGGGAGGGTCTGATAAGAGAGCTGTGTAATGGGTTTGAATTGCTGATGGACAAAGAGAAAGGGGTGATCACTTTGGAGAGCTTGAGGGCCAACTCTGCTCTTCTGGGCCTCCAGGACCTCAAGGACGACGAGCTTCTGGGCATGATGAAGGTAGGAGATCTTGACGGCGACGGAGCTCTCTCTCAGATGGAGTTCTGCGTTTTGATGTTCAGATTAAGCCCTGATCTCATGGATCAGTCTTGGCTTTGGCTTCAACAGTCTCTTCACCATGAACTCAGTCACCATTCCAATTCATTCTGA 3615 0.4274 MIFSSFHLSNQVIADIVLLRERASFQYLVGGMGRVVVCLRKIGRTIILNWSANHMLPIFILHALFFTLVHCSARDTITLNNFISDERGDTLISAGEVFELGFFTPNGSSSSGRYLGIWYYLSNPLTVVWVANRDHPLPDAAGAFAIAEDGNLRVLDGSGRSYWGTNLEKSSSVHRIVKLMDSGNLIVSDGEQANHSVKMRWQSFANPTDTFLPGMKMDECLVLTSWRSYDDPAPGNFSFRQDQGENQYIIWKRSIRYWKSSVTSAFFASGEMSAAISYLLSNFTLRIFPNNSVPFLTSSLYGGTRLVMTYSGQLQYMKMDSQKVWSLVWAEPRDRCSVYNACGNFGTCNSKYDSMCKCLPGFKPNSPESWNFGDFSGGCSRKTTVCSENAESDTFLSLKMMKVGNPDAQFNAKNEMECKLECLNNCQCYAYSYEDPRSATQGARGDAACWIWYEDLNNLEEEYENGCDLHVRVAVSDIESTGRNCGTCGTNFIPYPLSTGPNCGDPLYSSFHCNITTGELNFETPAGTYQVISITPETRNFMIHSRNIVVCERDKLLRLNQSSPFHLTDKCNADPSTVNPIAPVKIGEEIELSWDPPLEPVCSYSFDCKDWPNSICNTTRDGKKRCLCNTNFLWDGLNLNCTIEASNGYQTGRRLSVPLIIAVTSTTVIVLILLSSTVTYVYMWKRRLAKTQEIRGYVQKNSAINLYDSERHVKDLTDLGRFKDDDGQAIDVPHFHLESILGATSNFSNANKLGQGGFGPVYKGKFPRGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCLEGDEKMLVYEYMPNRSLDSFIFDRKSCVLLDWNMRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETAANTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNIGFYQSDHELSLLGYAWHLWKVERGLDFMDQTLSQTCNADEYLKCLTVGLLCVQEDPNDRPIMSNVVFMLGSDSSTLPTPKQPAFVVRRCPSSRASTSSKLESCSHNDLTVTLENGRENMVSHGNVKQCVRIVETHIERMGGIGFEDLLPVMADNLGGEGLIRELCNGFELLMDKEKGVITLESLRANSALLGLQDLKDDELLGMMKVGDLDGDGALSQMEFCVLMFRLSPDLMDQSWLWLQQSLHHELSHHSNSF 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3355 1204 Gene3D - 1091 1204 - -
Bisa02g3355 1204 SMART serkin_6 747 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3355 1204 Pfam Protein tyrosine and serine/threonine kinase 750 1016 IPR001245 GO:0004672|GO:0006468
Bisa02g3355 1204 Pfam D-mannose binding lectin 126 218 IPR001480 -
Bisa02g3355 1204 ProSiteProfiles Protein kinase domain profile. 747 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3355 1204 ProSitePatterns Serine/Threonine protein kinases active-site signature. 868 880 IPR008271 GO:0004672|GO:0006468
Bisa02g3355 1204 Pfam PAN-like domain 389 458 IPR003609 -
Bisa02g3355 1204 SMART ntp_6 390 473 IPR003609 -
Bisa02g3355 1204 ProSiteProfiles EGF-like domain profile. 332 368 IPR000742 -
Bisa02g3355 1204 SUPERFAMILY alpha-D-mannose-specific plant lectins 127 232 IPR036426 -
Bisa02g3355 1204 Gene3D Transferase(Phosphotransferase) domain 1 823 1027 - -
Bisa02g3355 1204 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 63 1005 - -
Bisa02g3355 1204 SMART blect_4 80 207 IPR001480 -
Bisa02g3355 1204 CDD B_lectin 80 207 IPR001480 -
Bisa02g3355 1204 ProSitePatterns EF-hand calcium-binding domain. 1158 1170 IPR018247 -
Bisa02g3355 1204 CDD PAN_AP_plant 386 474 - -
Bisa02g3355 1204 Pfam EF-hand domain pair 1124 1176 IPR002048 GO:0005509
Bisa02g3355 1204 Gene3D - 69 205 IPR036426 -
Bisa02g3355 1204 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 712 822 - -
Bisa02g3355 1204 ProSiteProfiles PAN/Apple domain profile. 386 467 IPR003609 -
Bisa02g3355 1204 SUPERFAMILY Protein kinase-like (PK-like) 731 1018 IPR011009 -
Bisa02g3355 1204 ProSiteProfiles EF-hand calcium-binding domain profile. 1145 1180 IPR002048 GO:0005509
Bisa02g3355 1204 CDD STKc_IRAK 753 1018 - -
Bisa02g3355 1204 Pfam S-locus glycoprotein domain 265 365 IPR000858 GO:0048544
Bisa02g3355 1204 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 69 204 - -
Bisa02g3355 1204 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 823 1026 - -
Bisa02g3355 1204 ProSiteProfiles Bulb-type lectin domain profile. 76 200 IPR001480 -
Bisa02g3355 1204 Pfam Domain of unknown function (DUF3403) 1020 1065 IPR021820 GO:0004674
Bisa02g3355 1204 Gene3D Phosphorylase Kinase; domain 1 717 822 - -
Bisa02g3355 1204 SUPERFAMILY EF-hand 1087 1184 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3355 Bisa-ChrBisa02 83897053 83910195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3355 711 1036 Receptor kinase-like Gene Family AT4G23230 57.975 6.15e-124 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g3355 PK_Tyr_Ser-Thr 1.4e-45 CL0016