Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3354 ATGAAAATGGATAGAAACATAAAGCTAATTTCTTGGAGAAGCATCAGCGACCCTGCACCTGGGAACTTCACCTTTCAGCTAGCTCCAACAGGGGACGGCTATATCATTTCCAAAAACCCAGATCGACTATACTGGAAAGCTGGAAATCTCAATTCAGACGTACCACTCAGAATATCGAACTTGTTGACAAACTCCCGCGCAAAACCCGTCAATTGTTCGATGAAAGACATATACTCCTCTCAACGAAAAAAACAAAAAAACAATTCCTCCTCCTGTGGAGGGCAAGAGCTAGACACGGATTATAACTTTACGAGGCTAGTTATGAATGATACAGGGAAGATCCATTTTTTTAAGTATGAAGAAAATCTAGGAGGTGTATGGTCTACACAATGGAGTGAACCATCTGAGGACTGCAAAATATATAACTATTGCGGGAATTTTAGCAGCTGCAATAACAAGAATTTTCCCAAGTGCAATTGTTTGCCGGGATTTGAGCCGTCGCCAGAGAGTGGGACTGGGTCATCTGGAAAAGGGTGTGTCAGAAAATCAGCATCATGCGAAACGAAAGACATAATATTCTTAAACTTGACGAAGGTCAAAGTGGGGAACTCCGGCGCGGACGTTAAAGTAGACAGTGAAGACAAGTGCCATTCTCGATGCGTTAACGACTGCTCGACCTGCCAGGCTTATTCATATAGTGGTACGTGGTCGGACTCGGATCGAAGAGTGGCTTGCTTGATCTGGACTCAGGAATTACTTACTCTTCAAGAAAATTCTCCAGAAGATGGCATTGATCTTTCTGTCCGGGTGCAAATTTCGGACATTGAACCAACTGCCAAAACCTGTAGACCTTGTGGTACAAAAATAATTCCATATCCACTGAGCACTGGGCCAGACTGTGGAGATCCCATGTACTTGAAGCTAAACTGCGACAACTCCACAGGCGAGCTTAGCTTCATGATGCCCAGCCACAATCTGAGTGTAAAGAGGATCAACTCAGATGCTCGGAATTTGATTGTCCAAACTGATGACACAAACTTATGTGATGATAAAGATAAACGAGACCCGCTTGATCCGCCATTTAATGTCACCGACTGGTGCCATGGCAACAATGATATAGAGATTAGTTGGCAACGACCATTGGAGCCTCTATGTAATGACTCCACATACTGCAACAATTGGCGTCATTCATCCTGCAAAGTTACAGGTGATGGAAAACGAAGGTGCCTCTGTGATGCAAACTATCGCTGGAACGAGTCAACTTGCGCTGAAGATCGTTCCATTCCGGGGTCAAAAGAGCCGCCATCTGAAAGAAAAAACACACAGACTTTAATTCTTGCGGTAGCTCTTCCAAGCATGGCTTTCATGGCATGTTTGATCGCTTTTGCTTATGCATGGAGAAGGAAAATATTTCGTAATAGAGATAGGGGACGAGTTAAGAGAGTTCAAGAACGCATGTATGACAGTGAAAGACATATGAAAGATTTGATAGACTTGGAAGAACTCGAAGAAAAAGATACAGAGGGCATAGAGGTACCATATTATGATTTCGAAAGCATACTAGCAGCCACAGATAACTTTTCAGACGCAAACAAGCTAGGACGAGGGGGTTATGGCCCTGTTTACAAGGGTACTTTTCCGGGAGGACAAGATATTGCAGTAAAGAGGCTTTCGAATGTTTCATCTCAAGGCTTAAAGGAATTCAAGAATGAGGTTATTTTGATATCCAAACTTCAGCATCGGAACCTTGTCAGACTTCGAGGTTATTGCATCAAAGGAGATGAGAAAATCTTACTTTATGAATATATGCCAAACAAGAGTTTAGACAACTTCATATTTGATCCAACACGAAGTGTGCTTTTAGATTGGCAAATGCGGTTTGACATAATCTTAGGAGTGGCTCGAGGGATGCTTTATCTTCATCAAGACTCCAGATTGAGAGTGGTTCATAGAGATTTGAAAACTAGCAACATTCTCTTAGATCAGGAGATGCAACCGAAAATTTCAGACTTTGGGTTAGCCAAAATATTTGCAGGCAAAGAGACTGAAGCCAACACAGAGAGAGTAGTTGGAACATATGGATATATGTCTCCCGAATACGCGTTGGATGGGCAATTCTCAACCAAATCAGACATTTTCAGCTTTGGTGTAATGGTGCTTGAGATTATTAGTGGGAAAAAGAACACAGGATTCTTTCAGTCCAAACAAGTTTCCAGCCTTCTGGGTTACGCGTGGAGGCTGTGGACAGAGAATAAGTTGATGGATTTGATGGAGCAGTCCCTGAGTGGAAGTTGCAATGCAAATCAATTTATCAGATGTGCACAGGTTAGTCTCTTGTGTGTACAAGACGAACCGGGAGATCGACCCACCATGTCATACGTAGTGATAATGCTTGAAAGCGACACTGCAAGTCTCCCGACCCCTAAACAACCAACCTTTTTCATGAACAGAGCCCTTTCCAGTACAGCTTCTTCTTCTAGTAAACCTGAAACAATTCTGAAAACTGATAGTAGCTATTGGGAAGGACGATAG 2532 0.4277 MKMDRNIKLISWRSISDPAPGNFTFQLAPTGDGYIISKNPDRLYWKAGNLNSDVPLRISNLLTNSRAKPVNCSMKDIYSSQRKKQKNNSSSCGGQELDTDYNFTRLVMNDTGKIHFFKYEENLGGVWSTQWSEPSEDCKIYNYCGNFSSCNNKNFPKCNCLPGFEPSPESGTGSSGKGCVRKSASCETKDIIFLNLTKVKVGNSGADVKVDSEDKCHSRCVNDCSTCQAYSYSGTWSDSDRRVACLIWTQELLTLQENSPEDGIDLSVRVQISDIEPTAKTCRPCGTKIIPYPLSTGPDCGDPMYLKLNCDNSTGELSFMMPSHNLSVKRINSDARNLIVQTDDTNLCDDKDKRDPLDPPFNVTDWCHGNNDIEISWQRPLEPLCNDSTYCNNWRHSSCKVTGDGKRRCLCDANYRWNESTCAEDRSIPGSKEPPSERKNTQTLILAVALPSMAFMACLIAFAYAWRRKIFRNRDRGRVKRVQERMYDSERHMKDLIDLEELEEKDTEGIEVPYYDFESILAATDNFSDANKLGRGGYGPVYKGTFPGGQDIAVKRLSNVSSQGLKEFKNEVILISKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDNFIFDPTRSVLLDWQMRFDIILGVARGMLYLHQDSRLRVVHRDLKTSNILLDQEMQPKISDFGLAKIFAGKETEANTERVVGTYGYMSPEYALDGQFSTKSDIFSFGVMVLEIISGKKNTGFFQSKQVSSLLGYAWRLWTENKLMDLMEQSLSGSCNANQFIRCAQVSLLCVQDEPGDRPTMSYVVIMLESDTASLPTPKQPTFFMNRALSSTASSSSKPETILKTDSSYWEGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3354 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 91 822 - -
Bisa02g3354 843 ProSiteProfiles PAN/Apple domain profile. 186 271 IPR003609 -
Bisa02g3354 843 CDD STKc_IRAK 533 799 - -
Bisa02g3354 843 Pfam PAN-like domain 186 253 IPR003609 -
Bisa02g3354 843 Pfam Protein tyrosine and serine/threonine kinase 531 795 IPR001245 GO:0004672|GO:0006468
Bisa02g3354 843 MobiDBLite consensus disorder prediction 821 843 - -
Bisa02g3354 843 SMART ntp_6 188 270 IPR003609 -
Bisa02g3354 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 492 602 - -
Bisa02g3354 843 Pfam S-locus glycoprotein domain 77 167 IPR000858 GO:0048544
Bisa02g3354 843 CDD PAN_AP_plant 185 270 - -
Bisa02g3354 843 PIRSF SRK 384 841 IPR024171 GO:0004674
Bisa02g3354 843 PIRSF SRK 1 292 IPR024171 GO:0004674
Bisa02g3354 843 Gene3D Transferase(Phosphotransferase) domain 1 603 809 - -
Bisa02g3354 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Bisa02g3354 843 SUPERFAMILY Protein kinase-like (PK-like) 513 830 IPR011009 -
Bisa02g3354 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 806 - -
Bisa02g3354 843 SMART serkin_6 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3354 843 Gene3D Phosphorylase Kinase; domain 1 488 602 - -
Bisa02g3354 843 ProSiteProfiles Protein kinase domain profile. 527 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3354 Bisa-ChrBisa02 83893279 83896928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3354 502 838 Receptor kinase-like Gene Family AT4G23150 53.353 1.85e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g3354 PK_Tyr_Ser-Thr 3.6e-46 CL0016