Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3353 ATGAAGAGCTGCGAACTATGCAAGTATCCGGCGAGGGCCTACTGCGAATCGGACCAGGCTAGCTTGTGCTGGGACTGCGACGCTATGGTTCACGGGGCTAACTTCTTGGTGGCCAGGCACTCGAGGACTCTTCTATGCGATGCGTGCCAGTCTCCAACTCCGTGGAAAGCCACCGGTGCTGAGCTCGGAAACACTGTTTCGGTTTGCCTGAATTGTGACGGCGCAATGAACTTTAGCGGGGAAGATGGCGAGGAGAGCGACGGAGATAATGAGAGCAATGTAGACGCGGAAGACAATCACGATGAAGATGATGCCATGCTTGGCGAAGACGACGGCTGTGCGGAAGGCGGTGATGAGGACGGATACAATCAAGTAGTGATGAGTCAGTTTCCTTGGTCCTCCTCGACGCCGCCGCCGCCGCCTGCAAGTTCTTCGAGTAGCGATGAGTCAGTTTCGGGGCCTAATAATTGCAATAGGGATATTTCTGAATCAGCAACAGCAACTTCCTTGAAACGAAGGCGTCATCAGGATGCATCCGATCCTAATTTCCAGGACGGTCCGAGTCCAAGAGATATCGGGTGA 582 0.5395 MKSCELCKYPARAYCESDQASLCWDCDAMVHGANFLVARHSRTLLCDACQSPTPWKATGAELGNTVSVCLNCDGAMNFSGEDGEESDGDNESNVDAEDNHDEDDAMLGEDDGCAEGGDEDGYNQVVMSQFPWSSSTPPPPPASSSSSDESVSGPNNCNRDISESATATSLKRRRHQDASDPNFQDGPSPRDIG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3353 193 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bisa02g3353 193 MobiDBLite consensus disorder prediction 166 180 - -
Bisa02g3353 193 MobiDBLite consensus disorder prediction 80 193 - -
Bisa02g3353 193 CDD Bbox1_BBX-like 4 45 - -
Bisa02g3353 193 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bisa02g3353 193 MobiDBLite consensus disorder prediction 80 117 - -
Bisa02g3353 193 MobiDBLite consensus disorder prediction 145 165 - -
Bisa02g3353 193 Pfam B-box zinc finger 2 41 IPR000315 GO:0008270
Bisa02g3353 193 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3353 Bisa-ChrBisa02 83853932 83854659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3353 2 112 C2C2-CO-like Transcription Factor Family AT4G27310 54.955 7.20e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa02g3353 zf-B_box 2.8e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0936 12 15196374 15197294 Bisa02g3353 02 83853932 83854659 CCT
Bisa02g3353 02 83853932 83854659 Bisa02g3353 02 83853932 83854659 ECH