Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3350 ATGAAGAATCCATGGTTTTTCCTCTCTGTTCTTCTCCTCTGCTTCTCTTTTCACGCCAAACGTTCCCTTGGAGCTGAAGCCATCTCTGCAGATCAAACACTTTCTGGGGATCAAACTCTTATTTCTTCAGGTGGGGTCTTCGAATTGGGTTTCTTCAAGCCAGGTAATTCCTCAAACTACTACATAGGCATCTGGTATAAGAAGGTCTCTCAACAGACCATTGTTTGGGTAGCAAACAGAGAGAAACCTGTCTCTGATAAGAACGCTGCCAAATTAGTGATATCAAAAGGAAACTTAGTACTCTTAGACGAGTCTCAAGTCCCAGTTTGGTCCTCAAATTTGACTTCCACTTTGTCTAGTTCTGTAGTAGCCGTTCTCCTAGATTCTGGGAACCTTGTCTTGGTGAACAAGCCTGGTTCCTCGGAATACTTATGGCAAAGTTTTGATGACCCAACCGACACATGGCTTCCTGGTGGGAAAATTAAGCTCAACAATAAGACAAAACAGCCTCAGTACCTCACTTCTTGGAAGAACAACGAGAATCCTGCGACGGGTCTCTTCTCTTTGGAGTTAGACCCAAAAGGAACTTCCTCTTACTTCATTCTTTGGAACAAATCTGAGCAATATTGGACGAGTGGTCCTTGGAATGGCTATATTTTCAGCTTGGTCCCTGAAATGAGGGCCAATTTTTTATACAACTTCACCTTCGTGTCCAACGAGAACGAGAGCTATTTCACGTATTCCATGTATAACTCTTCCATTATATCTCGTTTCGTGATGGATGTTTCCGGGCAGATCAAGCAACTCTCATGGTTGGAAAGGACAAGGCAATGGAATTTATTTTGGTCTCAGCCCCGAAGACAGTGTGAGGTTTATGCTTTCTGTGGCGCGTTTGGAAGCTGCACTGAGAATTCCATGCCCTTCTGTACTTGCTTGAGTGGTTTTAAGCCGAAGTCACAGGCCGATTGGGATGTGGAAGATCACTCAGGTGGGTGTGTGAGAAAAACTAAGTTGCAATGTGAGAATCCAAGTTCTTCTAATGGAGAGAAAGACAGGTTTCTGGTAATTCCAAACATGGTCTTACCTAAACATGCACAATCTGTTGGGGTTGGGAATGCAGGGGAATGCGAGTCAAGATGCTTGAACAATTGTTCTTGCTCTGCCTATGCTTATGTTAATAATGTCTGTTCTGTTTGGAAAGGAGAGTTATTAAATCTGCAGCAACTTTCTCAAGATGACAGTAGTGGAGAAACGTTATGTCTAAAGCTTGCAGCTTCTGAGTTTTCTGATCCTAAACACAAAAATGAAGACATTGTTCGCATTGCGGTTGGCACAATTTTTGGCATAGGAATTCTCCTAGCTTTGCTCCTTTTTGTGGTGATCAGGAGGAGAAAGAGAATAGTTGGGATAGGAAAATCAGTGGAGGGTTCATTGACCGCTTTTGGGTACAGAGATTTACAAAATGCAACGAAGAGTTTCTCTGAGAAATTAGGAGGAGGGGGTTTTGGTTCTGTTTTCAAAGGCACATTGTCTGATTCAAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGTGAGAAGCAGTTCAGATCAGAAGTCAGCACAATAGGAACGGTCCAACATGTTAATCTTGTTCGTCTTCGTGGGTTCTGCTCTGATGGCACCAGAAAGCTTCTGGTTTATGATTACATGCCAAATGGCTCTTTGGATTCCCATCTGTTTAAGGAAAAGAACTCGAAGAAACTAGACTGGAAGCTAAGGTACCAAATTGCTCTAGGAACAGCCAGGGGATTAACTTATCTCCACGAGAAGTGCAGAGACTGCATCATACATTGTGACATAAAGCCAGAAAACATTCTTTTGGATTCTGAGTTTTGTCCGAAAGTTGCAGACTTTGGGCTCGCGAAGCTAGTTGGAAGGGATTTCAGTAGAGTCCTGACAACAATGAGAGGAACAAGGGGCTATCTCGCACCAGAGTGGATTTCTGGTGTGGCTATCACAGCAAAAGCCGATGTTTACAGCTATGGAATGATGCTGTTTGAGCTTGTATCAGGAAGGAGGAACTCGGAGCCATCTGAAGATGGCCAAGTCAAGTTCTTTCCCACTTGGGCCGCACATGTGGTAATGCGTGGAGGTGATGTTCTTAGCCTGTTAGATCCCTCGTTGAAGGGAAATGCTGATGTGGATGAGGTGACGAGGATATTAAAGCTTGCCTCATGGTGTGTACAAGATGATGAGAGTCAGAGGCCATCCATGGGTCAGGTGGTTCAAATACTTGAGGGTGTACTGGATGTGAATGTGCCTCCTATTCCAAGGTCACTTCAACTGTTTGTTGACAATAATGAGGACATAGTTTTCTTCACTGACTCAAGCTCCAATCAGAGTTCACAGGTAAGGAGCAAGGTCTCAACAGGCTCTTCTCAAGCCAAAAGCAATGTCTCTTCAGCAAGTTCCAAGTCCTTGAGAGAAAATTAA 2481 0.4373 MKNPWFFLSVLLLCFSFHAKRSLGAEAISADQTLSGDQTLISSGGVFELGFFKPGNSSNYYIGIWYKKVSQQTIVWVANREKPVSDKNAAKLVISKGNLVLLDESQVPVWSSNLTSTLSSSVVAVLLDSGNLVLVNKPGSSEYLWQSFDDPTDTWLPGGKIKLNNKTKQPQYLTSWKNNENPATGLFSLELDPKGTSSYFILWNKSEQYWTSGPWNGYIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNSSIISRFVMDVSGQIKQLSWLERTRQWNLFWSQPRRQCEVYAFCGAFGSCTENSMPFCTCLSGFKPKSQADWDVEDHSGGCVRKTKLQCENPSSSNGEKDRFLVIPNMVLPKHAQSVGVGNAGECESRCLNNCSCSAYAYVNNVCSVWKGELLNLQQLSQDDSSGETLCLKLAASEFSDPKHKNEDIVRIAVGTIFGIGILLALLLFVVIRRRKRIVGIGKSVEGSLTAFGYRDLQNATKSFSEKLGGGGFGSVFKGTLSDSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSDGTRKLLVYDYMPNGSLDSHLFKEKNSKKLDWKLRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDSEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSEPSEDGQVKFFPTWAAHVVMRGGDVLSLLDPSLKGNADVDEVTRILKLASWCVQDDESQRPSMGQVVQILEGVLDVNVPPIPRSLQLFVDNNEDIVFFTDSSSNQSSQVRSKVSTGSSQAKSNVSSASSKSLREN 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3350 826 FunFam Serine/threonine-protein kinase 566 769 - -
Bisa02g3350 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 216 IPR036426 -
Bisa02g3350 826 ProSiteProfiles PAN/Apple domain profile. 340 420 IPR003609 -
Bisa02g3350 826 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Bisa02g3350 826 SUPERFAMILY Protein kinase-like (PK-like) 476 797 IPR011009 -
Bisa02g3350 826 PIRSF SRK 2 818 IPR024171 GO:0004674
Bisa02g3350 826 PANTHER OS07G0415500 PROTEIN 9 773 - -
Bisa02g3350 826 CDD STKc_IRAK 497 763 - -
Bisa02g3350 826 CDD B_lectin 31 151 IPR001480 -
Bisa02g3350 826 Gene3D Phosphorylase Kinase; domain 1 460 565 - -
Bisa02g3350 826 Pfam D-mannose binding lectin 73 177 IPR001480 -
Bisa02g3350 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Bisa02g3350 826 MobiDBLite consensus disorder prediction 795 826 - -
Bisa02g3350 826 SMART serkin_6 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3350 826 FunFam Receptor-like protein kinase 4 459 565 - -
Bisa02g3350 826 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3350 826 CDD PAN_AP_plant 336 424 - -
Bisa02g3350 826 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Bisa02g3350 826 SUPERFAMILY Hairpin loop containing domain-like 350 402 - -
Bisa02g3350 826 FunFam Serine/threonine-protein kinase 20 148 - -
Bisa02g3350 826 SMART blect_4 31 151 IPR001480 -
Bisa02g3350 826 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3350 826 SMART ntp_6 348 423 IPR003609 -
Bisa02g3350 826 Gene3D Transferase(Phosphotransferase) domain 1 566 769 - -
Bisa02g3350 826 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Bisa02g3350 826 Pfam PAN-like domain 348 405 IPR003609 -
Bisa02g3350 826 Gene3D - 22 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3350 Bisa-ChrBisa02 83824750 83827230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3350 449 771 Receptor kinase-like Gene Family AT5G20050 41.620 7.05e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa02g3350 Pkinase 1.1e-49 CL0016