Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3348 ATGGTGAGAACTCCTTGCTGTGACAAAAATGGACTCAAGAAAGGCACGTGGACACCTGAGGAAGACAGCAAGTTGCTGGCTTATGTTGCTAGGTATGGCCATTGGAATTGGCGCCAACTCCCCAAGTTTGCAGGTCTTGCAAGATGTGGAAAAAGCTGCAGATTGAGGTGGATGAACTATCTGAGGCCAAATATCAAAAAAGGGAATTACACTCTAGAAGAAGACAACACTATTATTAAACTCCACGCAAAGCTGGGTAATAGATGGTCTAGGATTGCCGCTCACTTACCTGGAAGATCAGATAATGAGATAAAAAATCACTGGCACTCCACCCTTAAGAAGCGTGTTCTTCAACGGAATCAAGAGAGAGACTCACAAGCAAACCCTGTCACTTTCCTAAATACTCCGGCTGATCCATCACCTTCCCATCACATTCAGAATAATCTGGTTCTGGAACATGACTTTGCTTTCCTAGGCGTCTACACTGAAGAACCTGTAACTGCAGATTTCTGGCCCGACATTTCCTACTTACCGAGTGAATTGCTCGCGCCATTTGTGACTGAACCCGAAATTTTTAGTCCACTCTATGATGAACAACTTTGGACTCACACTCACTCACAGTAA 624 0.4439 MVRTPCCDKNGLKKGTWTPEEDSKLLAYVARYGHWNWRQLPKFAGLARCGKSCRLRWMNYLRPNIKKGNYTLEEDNTIIKLHAKLGNRWSRIAAHLPGRSDNEIKNHWHSTLKKRVLQRNQERDSQANPVTFLNTPADPSPSHHIQNNLVLEHDFAFLGVYTEEPVTADFWPDISYLPSELLAPFVTEPEIFSPLYDEQLWTHTHSQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3348 207 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa02g3348 207 CDD SANT 69 112 IPR001005 -
Bisa02g3348 207 MobiDBLite consensus disorder prediction 120 140 - -
Bisa02g3348 207 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g3348 207 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bisa02g3348 207 CDD SANT 16 61 IPR001005 -
Bisa02g3348 207 Gene3D - 7 67 - -
Bisa02g3348 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa02g3348 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g3348 207 SMART sant 66 114 IPR001005 -
Bisa02g3348 207 SMART sant 13 63 IPR001005 -
Bisa02g3348 207 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 125 - -
Bisa02g3348 207 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g3348 207 FunFam MYB-related transcription factor 13 66 - -
Bisa02g3348 207 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g3348 207 MobiDBLite consensus disorder prediction 122 140 - -
Bisa02g3348 207 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3348 Bisa-ChrBisa02 83767869 83769822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3348 1 206 MYB Transcription Factor Family AT2G31180 47.826 4.84e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3348 Myb_DNA-binding 2e-13 CL0123