Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3347 ATGAGGAAGGTAAGCAGTGACAAAAGTGGATTATTGAAGAAAGGCACATGGACGCCGGAGGAAGACAGAAAGTTAATTGCTTATGTCACTAGATATGGCTGCTGGAATTGGAGCCAGCTTCCCAGATTTGCAGGTCTAGAAAGGTGTGGAAAGAGTTGCAGACTGAGATGGCTCAATTATATGAGGCCAGGCGTCAAGAGAGGAAACTACACTCCAGAAGAAGATGAAATTATTATCAGACTCCACCAACAGCTTGGTAACAGGTACGCACGTGAAGTGATTTCTAGTAACAAAGAGAGTAACGAGGAATTTGTTACGAAGGAACACGAGGACTTTGGTTTTGTGGATCCGTACGATGAGGTAATGGGAGGAAACTTCTGGACAGAGCCATTTGTGGATCACGACTGTGTCATTTCCCATGTGACTCATGATGAACCCCAACATTACACTCCAAGTCCTATGTCTGATAATGTTGAAGAATTTTGGGCTCACGACAATTTCTATGACCATTATTCTGGCTTCGTCTAG 528 0.4375 MRKVSSDKSGLLKKGTWTPEEDRKLIAYVTRYGCWNWSQLPRFAGLERCGKSCRLRWLNYMRPGVKRGNYTPEEDEIIIRLHQQLGNRYAREVISSNKESNEEFVTKEHEDFGFVDPYDEVMGGNFWTEPFVDHDCVISHVTHDEPQHYTPSPMSDNVEEFWAHDNFYDHYSGFV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3347 175 CDD SANT 16 61 IPR001005 -
Bisa02g3347 175 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 90 - -
Bisa02g3347 175 Gene3D - 13 66 - -
Bisa02g3347 175 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g3347 175 SUPERFAMILY Homeodomain-like 15 90 IPR009057 -
Bisa02g3347 175 SMART sant 66 103 IPR001005 -
Bisa02g3347 175 SMART sant 13 63 IPR001005 -
Bisa02g3347 175 FunFam MYB-related transcription factor 13 66 - -
Bisa02g3347 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Bisa02g3347 175 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3347 Bisa-ChrBisa02 83738269 83739478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3347 12 90 MYB Transcription Factor Family AT2G31180 62.025 2.13e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa02g3347 Myb_DNA-binding 7.4e-13 CL0123