Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3345 ATGAGAAAGGCAAGCAGTGACAAAAGTGGATTATTGAAGAAAGGCACATGGACGCCGGAGGAAGACAGAAAGTTAGTTGCTTATGTCACTAGATATGGCTGCTGGAATTGGCGCCAGCTTCCCAGATTTGCAGGTCTAGCAAGGTGTGGAAAGAGTTGCAGGCTGAGATGGCTCAATTATCTGAGGCCAGGCCTCAAGAGAGGGAACTATACTCCCGAAGAAGATGAAATTATTATCAGACTCCACCGACAGATTGGTAACAGATGGTCTGCTATAGCAGCGAAGCTTCCGGGAAGAACTGACAACGAAATAAAGAATCACTGGCACACCAACCTCAAGAACAAGCACCTTTATCAACTTCATCTAAGCAAGTCTGACGTCGATACTCATGACAGAGATGACATAAATATAATCTTCAAACTGAGCAACATCAACGATCATTGTGAGGGCATTAATATTACTGACGCAGGGATGAGTTCTCAGACCACCGATGTTGGGAAATCCGGCCCAGAGACAGAGACAAGCTTGACTAGTGAGTCGTCATCGGACATAACCAGACAGAGTAACGAAGAATTGGTTACGGAGGAGCACGAGGCCTTGGGTTTTGTGGATGCGTACGATGAGGTAATGGGAGGAAGCTTCTGGACAGAGCCATTTGTGGCTGACGACTCTCTCATTTCTCATGTGACTCATGATGAACACCGATGCTTCACTCCCAGTCCTATATCAGATAATATTGCAGAATTTTCGACTCTCAACAATTTCTATGACCACTATTCTGGCTTCTTCTAG 792 0.4545 MRKASSDKSGLLKKGTWTPEEDRKLVAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPGLKRGNYTPEEDEIIIRLHRQIGNRWSAIAAKLPGRTDNEIKNHWHTNLKNKHLYQLHLSKSDVDTHDRDDINIIFKLSNINDHCEGINITDAGMSSQTTDVGKSGPETETSLTSESSSDITRQSNEELVTEEHEALGFVDAYDEVMGGSFWTEPFVADDSLISHVTHDEHRCFTPSPISDNIAEFSTLNNFYDHYSGFF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3345 263 CDD SANT 69 112 IPR001005 -
Bisa02g3345 263 CDD SANT 16 61 IPR001005 -
Bisa02g3345 263 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g3345 263 Gene3D - 13 66 - -
Bisa02g3345 263 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g3345 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g3345 263 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bisa02g3345 263 Gene3D - 69 115 - -
Bisa02g3345 263 FunFam MYB-related transcription factor 13 66 - -
Bisa02g3345 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 61 IPR017930 -
Bisa02g3345 263 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 193 - -
Bisa02g3345 263 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g3345 263 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa02g3345 263 MobiDBLite consensus disorder prediction 155 186 - -
Bisa02g3345 263 SMART sant 13 63 IPR001005 -
Bisa02g3345 263 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3345 Bisa-ChrBisa02 83621934 83623150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3345 2 222 MYB Transcription Factor Family AT1G06180 43.891 8.54e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3345 Myb_DNA-binding 1.3e-12 CL0123