Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3344 ATGGTGGGAAGCCCATCCTGCGACACACGTGTGACGAAGAACGGCACGTGGACAGCAGAAGAAGACAGCAAGTTGGTTGCTTATGTTACCAGTTATGGCCATTGGAATTGGCGCCAACAGCCCAATTTCGCAGGACTTGCAAGGTGTGGAAAGAGCTGTAGACTTAGATGGTTGAATTACCTGAAGCCAGGCATCAAAAGAGGGAATTACACCCAGCAAGAAGATGAAACTATCATCAGGCTTCACCGAGAGCTGGGTAATAGATGGTCTAAGATTGCAGCTCATTTACCAGGAAGGACAGATAACGAGATTAAAAACCACTGGCACGCCAAACTGAAGAAGCGCCTTCAAGTTCAACAAAAGCCACACAATAATAGTACTCTTGGAAAAGCTAAAGTTTTTAAGCCAACGGAAGATCAAAATCAAGGCCCACTTGAATCAAGGCAAGAGATCAGAGGCTCGGTCACAAATAGTGCTTCTTCTCCTTCACAATGCAATTCATCAGAAGTGGCTAATTCCCAAATCTCCAATACCTTCCCTGTGTCTTGTACAGATACGGGTGCTTACGGTGGCAGCGACGAAAATTTGGTTGTGGAAGATTATTATGATGACTTGGCTTTTCTGGATACGTTCATTGAGCCTATAAGTGAAAACTTTTGGACAGAGCCATATATGGTCGACAATAGTGATGCATCAGTACCCTTGTCCACTGAACCTAATCAATACTCTAGTCCTGTGTGGGATGAGCAATGTTGGGGACACAATAATCAATACTCTAGTCCAGTGTGGGATGAACAACTTTGGGGACACAACAATTAG 819 0.4444 MVGSPSCDTRVTKNGTWTAEEDSKLVAYVTSYGHWNWRQQPNFAGLARCGKSCRLRWLNYLKPGIKRGNYTQQEDETIIRLHRELGNRWSKIAAHLPGRTDNEIKNHWHAKLKKRLQVQQKPHNNSTLGKAKVFKPTEDQNQGPLESRQEIRGSVTNSASSPSQCNSSEVANSQISNTFPVSCTDTGAYGGSDENLVVEDYYDDLAFLDTFIEPISENFWTEPYMVDNSDASVPLSTEPNQYSSPVWDEQCWGHNNQYSSPVWDEQLWGHNN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3344 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa02g3344 272 ProSiteProfiles Myb-like domain profile. 13 61 IPR001005 -
Bisa02g3344 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Bisa02g3344 272 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bisa02g3344 272 CDD SANT 16 61 IPR001005 -
Bisa02g3344 272 Gene3D - 68 141 - -
Bisa02g3344 272 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g3344 272 MobiDBLite consensus disorder prediction 116 171 - -
Bisa02g3344 272 SMART sant 13 63 IPR001005 -
Bisa02g3344 272 SMART sant 66 114 IPR001005 -
Bisa02g3344 272 FunFam MYB-related transcription factor 13 66 - -
Bisa02g3344 272 Gene3D - 7 67 - -
Bisa02g3344 272 MobiDBLite consensus disorder prediction 140 171 - -
Bisa02g3344 272 CDD SANT 69 109 IPR001005 -
Bisa02g3344 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g3344 272 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Bisa02g3344 272 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3344 Bisa-ChrBisa02 83573393 83580228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3344 1 230 MYB Transcription Factor Family AT2G31180 45.217 7.91e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3344 Myb_DNA-binding 1.6e-09 CL0123