Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3343 ATGGTGAGAGGTCCTTTCTTTGACGAAAATGGAGTAAAGAGAGGTGCGTGGAGTGAAGAAGAGGACGAGAGGCTTAAATCTTATGTTCAGACCTATGGCCACCCTAATTGGCGTCAACTTCCCAAACTCGCAGGAAGAACCGACAACGATGTGAAAAACCACTGGCATAGCCAACTCAAGACGCGACCGAAGGGAAAAGACTGGAGTATTAACTCTGAGTTGAAAGCGAAGAAGCGAAATCATAGTAATAATAGCAGTGGGGAATATTCAGAATGTGATATGATGAAAGTTGTGGCTGAGTCTCACAGTATATTAGAAAGCTCGTCGATTGAGTGCACACAGCAAATAGCAGATCAAGATAACTCTGCTTCAGTGGTATCCATTGAAGACACAACAGAATCAACGGTGAATGGTTCAGGTTCGGCAGAAGAAGAATGCAGCGAGGCTTCATGGCAAACTAACAGCTTTCTAGAATTCAGTGGCAATTTTTGGACTGAACCGTTCATATTAGAAAATACTTATGATGAATATTATAACTCTGACTATCAAATTGGTGGAAGTGGAGACATTTTTTCATATGATGGTCCGGAGTTGTATTAA 600 0.4167 MVRGPFFDENGVKRGAWSEEEDERLKSYVQTYGHPNWRQLPKLAGRTDNDVKNHWHSQLKTRPKGKDWSINSELKAKKRNHSNNSSGEYSECDMMKVVAESHSILESSSIECTQQIADQDNSASVVSIEDTTESTVNGSGSAEEECSEASWQTNSFLEFSGNFWTEPFILENTYDEYYNSDYQIGGSGDIFSYDGPELY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3343 199 CDD SANT 16 56 IPR001005 -
Bisa02g3343 199 PANTHER OS09G0431300 PROTEIN 1 45 - -
Bisa02g3343 199 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Bisa02g3343 199 SUPERFAMILY Homeodomain-like 10 69 IPR009057 -
Bisa02g3343 199 SMART sant 13 61 IPR001005 -
Bisa02g3343 199 Gene3D - 12 64 - -
Bisa02g3343 199 ProSiteProfiles Myb-like domain profile. 9 59 IPR001005 -
Bisa02g3343 199 MobiDBLite consensus disorder prediction 45 70 - -
Bisa02g3343 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3343 Bisa-ChrBisa02 83520289 83521258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3343 1 132 MYB Transcription Factor Family AT2G31180 28.108 2.38e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa02g3343 Myb_DNA-binding 6.2e-13 CL0123