Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3342 ATGGTGAAAGGTCCTTATTATGACCAAAATGGTATGAAGAGAGGTGCGTGGAGTAAGGAAGAGGATGACAAGTTAAGAGCATATGTTGAGAGATGTGGTCATTCCAATTGGCGTCAACTTCCCAAATTTGCAGGTTTAAGGAGGTGTGGAAAAAGTTGTAGACTTCGCTGGGTAAACTACTTACGGCCAAATGTAAAACATGGAAATTACACCCAGGAAGAAGACCAAAAAATCATCAAATTACATCAACAACATGGAAATAAATGGTCTCTGATTGCTGGACAATTCCAAGGAAGGACAGACAACGAAATAAAGAACCACTGGCATAGCCACCTGAAGAAGCGCTTAGAATGCAATCGCGAGAGCATAACGGAGCCTAGTGATATATCTGAAGCAGACGACACAACTCAACCTTCTGAATCTGAAAACCCAATCCTTGATGGTGCTCCCAGCTCCTATAATATATTAGAAAGCTCACATATACAAAATTCATGCTCGACCTTCACACCCAGAGCAGAATGTAATGCTAAATATGCTGCATGCGAAATATTTGAAGAACTCAGTAATTTTTGGACCCAACCATTCATCCCAGAAAATACTTATAGTCAGTATAACTATTGTAGTCCCTACGACTATGTAGCAGGTGGGATAGGCATGGATGAATATCTTTTATACTTCTTTGATAATACAGAGTTTTTGTGCCAGGTCATGCAAGAATTGCCAAGAGATCCTAGTGATATACAGAACCAATGATTGCGGAAAACATCGAAGCTAAGAATGGCTAGCTATAGAGCAATGTCATCATTACGCTGA 813 0.401 MVKGPYYDQNGMKRGAWSKEEDDKLRAYVERCGHSNWRQLPKFAGLRRCGKSCRLRWVNYLRPNVKHGNYTQEEDQKIIKLHQQHGNKWSLIAGQFQGRTDNEIKNHWHSHLKKRLECNRESITEPSDISEADDTTQPSESENPILDGAPSSYNILESSHIQNSCSTFTPRAECNAKYAACEIFEELSNFWTQPFIPENTYSQYNYCSPYDYVAGGIGMDEYLLYFFDNTEFLCQVMQELPRDPSDIQNQXLRKTSKLRMASYRAMSSLR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3342 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 61 IPR017930 -
Bisa02g3342 270 CDD SANT 69 112 IPR001005 -
Bisa02g3342 270 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa02g3342 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g3342 270 CDD SANT 16 61 IPR001005 -
Bisa02g3342 270 FunFam Transcription factor RAX3 7 67 - -
Bisa02g3342 270 Gene3D - 14 66 - -
Bisa02g3342 270 Gene3D - 68 140 - -
Bisa02g3342 270 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g3342 270 SMART sant 13 63 IPR001005 -
Bisa02g3342 270 SMART sant 66 114 IPR001005 -
Bisa02g3342 270 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g3342 270 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bisa02g3342 270 MobiDBLite consensus disorder prediction 128 149 - -
Bisa02g3342 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 160 - -
Bisa02g3342 270 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g3342 270 MobiDBLite consensus disorder prediction 123 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3342 Bisa-ChrBisa02 83491630 83493857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3342 1 200 MYB Transcription Factor Family AT2G31180 43.564 1.78e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3342 Myb_DNA-binding 5.1e-13 CL0123