Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3341 ATGGTGAAAGGTCCCTATTATGACCAAAATGGATTGAAGAGAGGTGCGTGGAGTAAGGAAGAGGATGACAAGTTAAGAGCATATGTTGAAAGATGTGGTCATTCCAACTGGCGTCAACTTCCCAAATTTGCAGGTTTAAGGAGGTGTGGAAAAAGTTGCAGACTTCGCTGGGTAAACTACTTACGGCCAAATGTAAAACATGGAAATTACACCCAGGAAGAAGACCAAAAAATCATCAAATTACATCAACAACATGGAAATAAATGGTCTCTGATTGCTGGACAATTACAAGGAAGGACAGACAACGACATAAAGAACCATTGGCATAGCCACCTGAAGATGCGCGTCGAATGCAATGGTGAAGCAGACAGAACTCAGTCTTCTGAATCTGAAAACCCAATCCTTGATGGTGCTCCCAGCTCCTATAATATATTAGAGAGCTCACAGATACAAAATTCATCCTCGACCTTAACACTCAGAACAGAAAGCAATGCTAAATATTCTGCATGCGAAATATTTGAAGAAAGTAATTTTTGGACCCAACCATTCATCCCAGAAGATACTTATAGTCAGTATGACTATTATAGTCCCTATGACTATGCAGCAAGTGGGATAGGCATGGATGAATATCTTTCATACTTCTTTGATAATACAGAGTTTTTGTGCGAGGCCATGCAAGAATTGCCAAGAGATCCTAGTAAGGATATACAGAAGCAATGATTGAGGAAAACATCAAAGCTAAGAATGGCTAGCTATGGAGCAATGACATCGTTACGCTGA 780 0.4013 MVKGPYYDQNGLKRGAWSKEEDDKLRAYVERCGHSNWRQLPKFAGLRRCGKSCRLRWVNYLRPNVKHGNYTQEEDQKIIKLHQQHGNKWSLIAGQLQGRTDNDIKNHWHSHLKMRVECNGEADRTQSSESENPILDGAPSSYNILESSQIQNSSSTLTLRTESNAKYSACEIFEESNFWTQPFIPEDTYSQYDYYSPYDYAASGIGMDEYLSYFFDNTEFLCEAMQELPRDPSKDIQKQXLRKTSKLRMASYGAMTSLR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3341 259 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g3341 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa02g3341 259 CDD SANT 69 112 IPR001005 -
Bisa02g3341 259 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 167 - -
Bisa02g3341 259 SMART sant 13 63 IPR001005 -
Bisa02g3341 259 SMART sant 66 114 IPR001005 -
Bisa02g3341 259 CDD SANT 16 61 IPR001005 -
Bisa02g3341 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g3341 259 FunFam Transcription factor RAX3 7 67 - -
Bisa02g3341 259 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa02g3341 259 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g3341 259 Gene3D - 14 66 - -
Bisa02g3341 259 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g3341 259 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bisa02g3341 259 Gene3D - 69 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3341 Bisa-ChrBisa02 83414247 83416218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3341 1 116 MYB Transcription Factor Family AT5G16770 61.207 2.42e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3341 Myb_DNA-binding 4.8e-13 CL0123