Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3336 ATGGGAAGAGCACCTTGCTGCGACAAAAACGGGCTGAAGAAAGGTCCCTGGACTCCTGAAGAAGACACCAACCTCATCAACTACATTCAAACCCATGGCGCAGGGAATTGGCGAGCCCTCCCCAAGAATGCTGGTCTTCAAAGATGTGGGAAAAGTTGTCGTCTTCGATGGACTAATTACCTCCGACCCGACATCAAGAGAGGAAGATTCTCCTTCGAAGAAGAGGAGACGATTATTCAGCTGCACAGTATCTTGGGAAACAAATGGTCGTCTATAGCAGCTCGACTTCCAGGAAGAACTGACAATGAAATAAAGAACTACTGGAACACCCACATAAGAAAGAGGCTGCTTCGAATGGGAATCGATCCTGTGACTCATGCTCCAAGACTTGATCTTCTCGACATATCCTCAGTTCTAAGATCGGTGTTAGGAAACCCATCACTTCTGAATCTGCAAGGCTTGTTGGGTGCGCAAGCACTGATGAACCCCGAATTGTTGAAGATGGCCAACACTCTGTTATCGTTGAAGAACGAAAACCCAGAGATGGTCTCACAGAATCTGCAACAAATTATTGAAGCTCAGAATTTGAATTCTCAACTTCAAGCACAAACCCAGATCGATCCTGCGCAAGTACAATTCAGTAGTCAGTTTCAGATGCCAATTGAAGCCAGCAATGTGGGGGGTTTGACGAACATGGGGTTTTCAGAGTCCCAGGAGAATTCGATTCCATCGTATGTGGATGAGAACTTCTTGTTGCAACAAAACCAATTTCTGGGAGATTCGAGCTTGTTTCAGAACGTGGGGTATGACTCTGTTTTGTCGACGCCTTCGTCGAGTACGACCCCCTTGAACTCGTCGTCGACATATGTGAATAGCAATGGGGAGGAGGAGAGAGATAGCCATTGCAGCGACTGGTTCAAGTTCGAAATTCCAGAAAGTCTGGACATTAATGACTTTTTGTAA 963 0.4611 MGRAPCCDKNGLKKGPWTPEEDTNLINYIQTHGAGNWRALPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSSIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSVLRSVLGNPSLLNLQGLLGAQALMNPELLKMANTLLSLKNENPEMVSQNLQQIIEAQNLNSQLQAQTQIDPAQVQFSSQFQMPIEASNVGGLTNMGFSESQENSIPSYVDENFLLQQNQFLGDSSLFQNVGYDSVLSTPSSSTTPLNSSSTYVNSNGEEERDSHCSDWFKFEIPESLDINDFL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3336 320 FunFam Transcription factor MYB39 69 130 - -
Bisa02g3336 320 CDD SANT 69 112 IPR001005 -
Bisa02g3336 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa02g3336 320 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g3336 320 CDD SANT 16 61 IPR001005 -
Bisa02g3336 320 MobiDBLite consensus disorder prediction 274 293 - -
Bisa02g3336 320 MobiDBLite consensus disorder prediction 274 298 - -
Bisa02g3336 320 SMART sant 13 63 IPR001005 -
Bisa02g3336 320 SMART sant 66 114 IPR001005 -
Bisa02g3336 320 FunFam MYB-related transcription factor 13 66 - -
Bisa02g3336 320 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa02g3336 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g3336 320 Gene3D - 69 116 - -
Bisa02g3336 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g3336 320 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa02g3336 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g3336 320 Gene3D - 13 66 - -
Bisa02g3336 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3336 Bisa-ChrBisa02 83290866 83292004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3336 1 320 MYB Transcription Factor Family AT4G21440 48.876 1.29e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3336 Myb_DNA-binding 3.6e-15 CL0123