Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3323 ATGACGATCGCCTCCATTTTGAGCAAAGCTTCCAGGACTTTCCATAGCTACCCTTCTTACTCTAAGCTTATTCTCCTCTGCACTCTCAGCGGTGGAGGTGTAGTGGCATACTCAGAATTACAATCCGATTCTGGACCTCCTAGTATTGACCATAATGAGCCCAGGAAAAAGAGAGTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTCTCCTTAAGGATCTGGATGCTTCATTATATGATGTTCAGGTTGTCTCACCTCGCAACTATTTTGCATTTACTCCCTTATTACCTAGCGTCACTTGTGGGACAGTTGAAGCACGGAGCATCGTGGAGCCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAGTAAAATTTTGGGAGGCGGAATGTGTCAAGATTGATGCTGCAAACAAGAAGGTTTTTTGTCAATCCAATATTGATGCCAACTTAGTGGGAAGTGGCGAATTTTCTCTGGATTATGACTTTTTGGTTGTAGCAACAGGAGCACAAGTAAATACTTTTAACACCCCAGGTGTCAAGGAGAACTGTCATTTTTTGAAGGAGGTGGAAGATGCTCAGAGGATCAGAAAGTCTGTGATAGATTGCTTTGAGAAGGCTAATCTTCCTAGTTTAACTGAAGAAGAGCGACGGACAAATCTTCATTTTGTAATTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCAGCAGAGCTGCATGATTATGTTCAAGAGGATTTAACCAAATTATATCCGACTGTTAAAGATATAGTGAAGATATCCGTAATCCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATCAGTTCATTTGCTGAGCAGAAGTTTGGAAGAGATGGAATAGAAGTTCAAACAGGATGCCGAGTTGTTAGTGTCGGTGACAAGGAAATTACAATGAAGATAAAATCAACAGGAGAGGTTTGCTCAGTACCCCATGGATTGGTTGTCTGGTCCACTGGCATTGGGACTCTTCCTGTTGTGAGGGACTTCATGGAACAAATTGGTCAGGCTAAAAGAAAGGTCCTAGAGACTGATGAATGGTTACGAGTGACAGGATCTGAAGATGTGTTTGCTATTGGTGATTGTGCTTCGATACATCAACGTAGAATCATGGATGACATCTCAGCCATATTCAAGGCTGCAGACAAAGACAACTCCGGTACCTTAACTGTTGAAGAATTCAAGGATTTGCTGGATGATATCATCATAAGATATCCTCAAGTGGAAATCTATTTGAAGAGCAAGCACATGCTTGATGTTACTGATCTGTGGAAAGATTCACAAGGGAGAGACAGAAATGAAATAGACATAGAAGAGTTTAAGAAGGCCCTCTGTCACGTGGATACACAGCTGAAGAGTCTGCCAGCAACAGCACAGGTTGCTGCCCAACAGGGTGCATATCTAGCTAGATGCTTGAACCGCTTGGAGCAAAGTACAAAGAATCCTGAAGGTCCTATGAAAATTAGAACATCTGGACGCCATAAGTTTCGTCCCTTCTGTTATAAGCATTTTGGGCAATTTGCTCCTCTGGGTGGGGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATAGGTCACAGTACTCAGTGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGGTGTTGGTGGTATCTGATTGGACTAGAAGATTCGTCTTTGGGAGAGATTCATGTCGTATTTAA 1737 0.4312 MTIASILSKASRTFHSYPSYSKLILLCTLSGGGVVAYSELQSDSGPPSIDHNEPRKKRVVVLGTGWAGTSLLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEVKFWEAECVKIDAANKKVFCQSNIDANLVGSGEFSLDYDFLVVATGAQVNTFNTPGVKENCHFLKEVEDAQRIRKSVIDCFEKANLPSLTEEERRTNLHFVIVGGGPTGVEFAAELHDYVQEDLTKLYPTVKDIVKISVIQSGDHILNMFDERISSFAEQKFGRDGIEVQTGCRVVSVGDKEITMKIKSTGEVCSVPHGLVVWSTGIGTLPVVRDFMEQIGQAKRKVLETDEWLRVTGSEDVFAIGDCASIHQRRIMDDISAIFKAADKDNSGTLTVEEFKDLLDDIIIRYPQVEIYLKSKHMLDVTDLWKDSQGRDRNEIDIEEFKKALCHVDTQLKSLPATAQVAAQQGAYLARCLNRLEQSTKNPEGPMKIRTSGRHKFRPFCYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFVFGRDSCRI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3323 578 Gene3D - 430 577 - -
Bisa02g3323 578 Gene3D - 47 396 - -
Bisa02g3323 578 Pfam EF hand 384 408 IPR002048 GO:0005509
Bisa02g3323 578 SUPERFAMILY EF-hand 336 464 IPR011992 -
Bisa02g3323 578 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Bisa02g3323 578 SUPERFAMILY FAD/NAD(P)-binding domain 223 378 IPR036188 -
Bisa02g3323 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Bisa02g3323 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Bisa02g3323 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Bisa02g3323 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 351 373 - -
Bisa02g3323 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 425 577 - -
Bisa02g3323 578 CDD EFh 383 454 IPR002048 GO:0005509
Bisa02g3323 578 PANTHER NADH DEHYDROGENASE 52 578 IPR045024 GO:0003954|GO:0006116
Bisa02g3323 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 48 408 - -
Bisa02g3323 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 381 IPR023753 GO:0016491
Bisa02g3323 578 SMART efh_1 383 411 IPR002048 GO:0005509
Bisa02g3323 578 SUPERFAMILY FAD/NAD(P)-binding domain 56 275 IPR036188 -
Bisa02g3323 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3323 Bisa-ChrBisa02 82921919 82927731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3323 1 578 Chloroplast and Mitochondria Gene Families AT4G21490 64.164 0.0 782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3323 02 82921919 82927731 Bisa02g3323 02 82921919 82927731 ECH