Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa02g3267 | ATGGCTGCCATAGATCAGTATTTCGAGGAGGCAGTGCCCCAAACCGAGTCCTTCGAAGAAGATAAATCTTGTTCAGAGAAGTGGAAATCTGCTGCTGATTCCATTGCAGATTCTGACAGAAATGGCTCGAACAGCTTTGACTGCAACATCTGCTTGGACTGTGTGCAAGATCCAGTGGTCACTCTTTGTGGTCATCTCTACTGCTGGCCCTGCATTTACAAATGGCTTCATTTTAGTGTCTCCTCCGAAGAAAACAATGAACAGCAGAATCCACAATGTCCGGTATGCAAGGCAGACGTTTCCCAATCGTCCCTGGTTCCACTATATGGCCGCGGCCAAGCCACGAGACCTTTGAAAGGCAAGTCCCACCAGGTAGGACTAGTTATACCTCGAAGACCCCATGGACCTTCGTGGGTGGTTGACCCTCCAAGATCATCTAATGCTACTCATATGCCTTCTCCACCAGATTCCCAATTTCATCATCGCCATTATCCTTATCATCCTCTACAGTTCAACTCAATTTCAGGCGGTTACACCTCACCGATGCTTAGCATGGATGGTGCACTGAGAAATGCATTCGATACGAGTATTGGAGTTTTTGGGGAGATGGTATATGCGAGAATGTTTGGTAACCAAGTAACAAACATATACAATTACCCTAATACTTATAATCTAGCAGGGAATAGTAATCCAAGGATCAGAAGGCATTTGATGCAAGCTGACAAGCAACTGAATAGAATCTGCTTTTTCCTGCTTTGTTGTGTAGTCTTGTGATGGGATGCCTTTGCTTATGGGTTAGGGCAGCACATGATTCATAAAAAAAGGACGCTAATGTAA | 837 | 0.4492 | MAAIDQYFEEAVPQTESFEEDKSCSEKWKSAADSIADSDRNGSNSFDCNICLDCVQDPVVTLCGHLYCWPCIYKWLHFSVSSEENNEQQNPQCPVCKADVSQSSLVPLYGRGQATRPLKGKSHQVGLVIPRRPHGPSWVVDPPRSSNATHMPSPPDSQFHHRHYPYHPLQFNSISGGYTSPMLSMDGALRNAFDTSIGVFGEMVYARMFGNQVTNIYNYPNTYNLAGNSNPRIRRHLMQADKQLNRICFFLLCCVVLXWDAFAYGLGQHMIHKKRTLM | 278 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa02g3267 | 278 | MobiDBLite | consensus disorder prediction | 112 | 157 | - | - | |
Bisa02g3267 | 278 | ProSitePatterns | Zinc finger RING-type signature. | 63 | 72 | IPR017907 | - | |
Bisa02g3267 | 278 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 111 | IPR013083 | - | |
Bisa02g3267 | 278 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 6 | 257 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Bisa02g3267 | 278 | FunFam | E3 ubiquitin-protein ligase RMA1H1 isoform A | 31 | 110 | - | - | |
Bisa02g3267 | 278 | Pfam | Zinc finger, C3HC4 type (RING finger) | 48 | 96 | IPR018957 | GO:0046872 | |
Bisa02g3267 | 278 | SUPERFAMILY | RING/U-box | 44 | 109 | - | - | |
Bisa02g3267 | 278 | ProSiteProfiles | Zinc finger RING-type profile. | 48 | 97 | IPR001841 | - | |
Bisa02g3267 | 278 | SMART | ring_2 | 48 | 96 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa02g3267 | Bisa-ChrBisa02 | 82106539 | 82107707 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa02g3267 | 41 | 247 | C3H Transcription Factor Family | AT4G27470 | 40.758 | 1.04e-40 | 139 |