Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3267 ATGGCTGCCATAGATCAGTATTTCGAGGAGGCAGTGCCCCAAACCGAGTCCTTCGAAGAAGATAAATCTTGTTCAGAGAAGTGGAAATCTGCTGCTGATTCCATTGCAGATTCTGACAGAAATGGCTCGAACAGCTTTGACTGCAACATCTGCTTGGACTGTGTGCAAGATCCAGTGGTCACTCTTTGTGGTCATCTCTACTGCTGGCCCTGCATTTACAAATGGCTTCATTTTAGTGTCTCCTCCGAAGAAAACAATGAACAGCAGAATCCACAATGTCCGGTATGCAAGGCAGACGTTTCCCAATCGTCCCTGGTTCCACTATATGGCCGCGGCCAAGCCACGAGACCTTTGAAAGGCAAGTCCCACCAGGTAGGACTAGTTATACCTCGAAGACCCCATGGACCTTCGTGGGTGGTTGACCCTCCAAGATCATCTAATGCTACTCATATGCCTTCTCCACCAGATTCCCAATTTCATCATCGCCATTATCCTTATCATCCTCTACAGTTCAACTCAATTTCAGGCGGTTACACCTCACCGATGCTTAGCATGGATGGTGCACTGAGAAATGCATTCGATACGAGTATTGGAGTTTTTGGGGAGATGGTATATGCGAGAATGTTTGGTAACCAAGTAACAAACATATACAATTACCCTAATACTTATAATCTAGCAGGGAATAGTAATCCAAGGATCAGAAGGCATTTGATGCAAGCTGACAAGCAACTGAATAGAATCTGCTTTTTCCTGCTTTGTTGTGTAGTCTTGTGATGGGATGCCTTTGCTTATGGGTTAGGGCAGCACATGATTCATAAAAAAAGGACGCTAATGTAA 837 0.4492 MAAIDQYFEEAVPQTESFEEDKSCSEKWKSAADSIADSDRNGSNSFDCNICLDCVQDPVVTLCGHLYCWPCIYKWLHFSVSSEENNEQQNPQCPVCKADVSQSSLVPLYGRGQATRPLKGKSHQVGLVIPRRPHGPSWVVDPPRSSNATHMPSPPDSQFHHRHYPYHPLQFNSISGGYTSPMLSMDGALRNAFDTSIGVFGEMVYARMFGNQVTNIYNYPNTYNLAGNSNPRIRRHLMQADKQLNRICFFLLCCVVLXWDAFAYGLGQHMIHKKRTLM 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3267 278 MobiDBLite consensus disorder prediction 112 157 - -
Bisa02g3267 278 ProSitePatterns Zinc finger RING-type signature. 63 72 IPR017907 -
Bisa02g3267 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 111 IPR013083 -
Bisa02g3267 278 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 6 257 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bisa02g3267 278 FunFam E3 ubiquitin-protein ligase RMA1H1 isoform A 31 110 - -
Bisa02g3267 278 Pfam Zinc finger, C3HC4 type (RING finger) 48 96 IPR018957 GO:0046872
Bisa02g3267 278 SUPERFAMILY RING/U-box 44 109 - -
Bisa02g3267 278 ProSiteProfiles Zinc finger RING-type profile. 48 97 IPR001841 -
Bisa02g3267 278 SMART ring_2 48 96 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa02g3267 Bisa-ChrBisa02 82106539 82107707 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3267 41 247 C3H Transcription Factor Family AT4G27470 40.758 1.04e-40 139