Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3255 ATGGGTTGTATAAATTCCAAGACTTCAGCTGTGGAAGATGGCCAGGAAGATTTGACAAAGAAATTGTCATCATCTAGCAAAAGGGGGTCGAAGCTGAGTGTTTCACGATTGAGTTCCTCAAAAGGGGATGAGGGTGTCTGGGCAAAAAAAAAGTTAGATAGTAGTGATGTGAAGATTTCATTAATTGACAAGAAAGCCAGTGGCTCATTGCAGTTGTATGATGATCACATAGAGAAAAAGGAAATAGAGAAGCCTGAATTGACTATCCTTAGTAATCCTGGTCTTGGAAGGGTTCCTAAGTCTGCAGAAGGAGAGCAAGTTGCAGCAGGATGGCCGACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCACGGAGTGCAAATACCTTTGAGAGGTTATATAAAATCGGCCAAGGAACGTACAGTACTGTTTATAAAGCACGTGATGTGACTCACCAAAAGATTGTTGCTTTGAAGAGAGTACGCTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTCTTCTGCGCAGGCTCGACCATCCAAATATAATCAAGTTGGAGGGCTTGATAACATCTCAAACCTCTCGCAGCTTGTACCTCATTTTTGAGTATATGGAGCATGATCTTACTGGACTAGCATCACGTCCCGGCATTAAGTTTTCTGAACCACAGGTTAAATGCTACATGCAACAGCTTCTTAGTGGATTGGATCATTGTCATAGCCGTGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAACAATGGCATCTTAAAAATTGCAGATTTTGGTTTGGCAAGTTTTTTTGACCCCCATCATAGTGTTCCGTTGACCAGTCGTGTAGTGACTCTCTGGTATAGACCGCCTGAACTTTTACTTGGAGCATCTCATTATGGAGTTGCAGTAGATTTGTGGAGCACTGGTTGCATATTGGGAGAACTATATAATGGCAGGCCCATATTGCCAGGAAAAACGGAGGTTGAGCAATTGCATAGGATATTTAAGCTTTGTGGGTCACCATCTGAGGACTATTGGCTTAAATCACGGTTGCCACATTCTGCAGTGTTTAAGCCTCCACATCATTATAGAAGATGTATTGCAGAAACATTCAAAGAATGTCCACCTGTTGCTGTGAAGCTTATAGAGACACTACTTTCTGTAGATCCTGTGCAACGAGGAACGGCAGCGAGTGCTCTGAAAAGTGAGTTCTTTACAACCGAACCCCTGGCTTGTGATTCATCAAGTTTACCGAGATATCCTCCCAGCAAAGAGATTGATTCTAAATTTCAGGATGAAGAAACTGGAAGGCAAGGAGCTATTGGAGGAAGAGAGCAGAAAATTCGCTTGGGAGTTAGACAAGAAAAGGAACCTGGGGCACTTCTTCCAGTCAAAGACAATGTATCAATACAGCAAGGACAACGTCATTCCAACTCAAAGGGCCGAAGTGAATTGTTCAACTGTCACAGAGAATCTGTTTCTGGATTGGATTATCCCCAACATAAACGGTCAGATTTTAAAGAAATGGAAAATAATTTCAGTGGGCATCTGTATAAGAGGCCTTCACATTCAGGTCCATTGGTTCAAGGTGCTCAATGGGCAAAGGGTGGACATTCAGGTCCATTGGTTCAAGGTGCTCAATGGGCAAAGGGTGGAAAGGAAGTTGACGAAGGGCCACTAGGTTCGAACCGAATCAACTTGTCAAAACTATCTGGTTTAGTGGCATCTAGGACTTCATTAGCTGAAGATCAGGAGGAAAAACTACTTCCCTTGCAGCCTACAAAATCAATTCAACCAAGAAGATATTTGGAGTCAACTAATGGATTGGAGTCAAGAAGGCAGGATAGAAAACGCCAGCCTCAACGAATTGCGGATCTCTGTCAAATGGAAAATGGCAGAGCCCCCACTAAAGAATTAACTCCGGGAGGGCGTGGGTCTATGGAAAACAAGATCTATCTCTCTGGTCCATTACTGGCTTCATCAAACAACATGGACCAGATGCTTAAAGAACATGATCGAAAGATCCAGGAGTTTTCAAGACGAGTACGAATAGACAAGTCAAGAGGCGAGAAAATTCGTCCGCGGCGAAAGTAG 2133 0.4327 MGCINSKTSAVEDGQEDLTKKLSSSSKRGSKLSVSRLSSSKGDEGVWAKKKLDSSDVKISLIDKKASGSLQLYDDHIEKKEIEKPELTILSNPGLGRVPKSAEGEQVAAGWPTWLSSVAGEAIKGWIPRSANTFERLYKIGQGTYSTVYKARDVTHQKIVALKRVRFDNLDPESVKFMAREILLLRRLDHPNIIKLEGLITSQTSRSLYLIFEYMEHDLTGLASRPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYNGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKSRLPHSAVFKPPHHYRRCIAETFKECPPVAVKLIETLLSVDPVQRGTAASALKSEFFTTEPLACDSSSLPRYPPSKEIDSKFQDEETGRQGAIGGREQKIRLGVRQEKEPGALLPVKDNVSIQQGQRHSNSKGRSELFNCHRESVSGLDYPQHKRSDFKEMENNFSGHLYKRPSHSGPLVQGAQWAKGGHSGPLVQGAQWAKGGKEVDEGPLGSNRINLSKLSGLVASRTSLAEDQEEKLLPLQPTKSIQPRRYLESTNGLESRRQDRKRQPQRIADLCQMENGRAPTKELTPGGRGSMENKIYLSGPLLASSNNMDQMLKEHDRKIQEFSRRVRIDKSRGEKIRPRRK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3255 710 CDD STKc_CDK9_like 134 418 - -
Bisa02g3255 710 SUPERFAMILY Protein kinase-like (PK-like) 128 423 IPR011009 -
Bisa02g3255 710 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Bisa02g3255 710 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3255 710 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3255 710 MobiDBLite consensus disorder prediction 619 636 - -
Bisa02g3255 710 Gene3D Transferase(Phosphotransferase) domain 1 217 454 - -
Bisa02g3255 710 MobiDBLite consensus disorder prediction 428 450 - -
Bisa02g3255 710 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Bisa02g3255 710 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Bisa02g3255 710 MobiDBLite consensus disorder prediction 594 659 - -
Bisa02g3255 710 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Bisa02g3255 710 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3255 710 MobiDBLite consensus disorder prediction 25 40 - -
Bisa02g3255 710 MobiDBLite consensus disorder prediction 691 710 - -
Bisa02g3255 710 MobiDBLite consensus disorder prediction 1 45 - -
Bisa02g3255 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bisa02g3255 710 PANTHER CELL DIVISION PROTEIN KINASE 132 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3255 Bisa-ChrBisa02 81908781 81913834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3255 126 462 Core Cell Cycle Gene Families AT5G10270 49.008 1.81e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa02g3255 Pkinase 1.7e-67 CL0016