Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3250 ATGGAAAGCCAAGAAAATATGGATCATCATCATCAGCAGGAAAGCCTGCAACCTCCTGCTTCGTCTTCTTCTTCAACCAAAGTTGAAAGAAGGATCATAGAGAAAAACAGAAGAAACCAGATGAAGATGCTCTACTCTAAGCTCAATTCTCTTCTCCCAAACAACCCCCACCAGGAAAGCTTACCACTGCCTGATCAGGTAGACCAGGCCATAACCTACATAAAGAATCTGGAGGGTAGAGTGAAGATGGCTCAGCAGAAGAAAGAAAGCTTGATGGGAAACAAAAGATCAGTCGCAAGCGGCTCAAGTAGCAATAGTGTTGCCGAAGCAAAAGGAATTAGCCAAATTAGGTCACCACAGATTGAGATTCGTGAAACGGGCTCCTCTCTAGAAATTGTGCTAATCACTGGCTTAGACAACAACTTCGTTTTCTATGAAATCATTCGCATCCTTCATGAAGAGAACATTGAGGTCGTCGCTGCCAATTCCTCACTTGATGGAGATTCAATGCATCACGTTGTTCATGCTGAGATAGGACAGTGTTGGTATCAATTCAGAGCAACAAAGGTGAGTGAGAGATTGAAAAGGTTTGTTTACGGATCCACAAGTGACGTAGAAATACAGCCGGAGCTGTGGGATTTTGAGATGGGTTTTGAACAATGGGAATTACTAAACCATAATTAA 684 0.4269 MESQENMDHHHQQESLQPPASSSSSTKVERRIIEKNRRNQMKMLYSKLNSLLPNNPHQESLPLPDQVDQAITYIKNLEGRVKMAQQKKESLMGNKRSVASGSSSNSVAEAKGISQIRSPQIEIRETGSSLEIVLITGLDNNFVFYEIIRILHEENIEVVAANSSLDGDSMHHVVHAEIGQCWYQFRATKVSERLKRFVYGSTSDVEIQPELWDFEMGFEQWELLNHN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3250 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 25 77 IPR011598 GO:0046983
Bisa02g3250 227 Pfam Helix-loop-helix DNA-binding domain 28 78 IPR011598 GO:0046983
Bisa02g3250 227 Gene3D - 19 105 IPR036638 GO:0046983
Bisa02g3250 227 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 22 199 - -
Bisa02g3250 227 MobiDBLite consensus disorder prediction 13 27 - -
Bisa02g3250 227 SMART finulus 31 83 IPR011598 GO:0046983
Bisa02g3250 227 FunFam Transcription factor bHLH162 19 103 - -
Bisa02g3250 227 Coils Coil 74 94 - -
Bisa02g3250 227 MobiDBLite consensus disorder prediction 1 29 - -
Bisa02g3250 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 95 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3250 Bisa-ChrBisa02 81811475 81812975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3250 16 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.968 2.96e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g3250 HLH 1.6e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3250 02 81811475 81812975 Bisa02g3250 02 81811475 81812975 ECH