Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3246 ATGGCTTTGTTGTTTAAGGATCTATCCAGGCTTTCAGCTTATCGAGATAGAAGATTCCCTGGAACACAAGAGGAATTTGAAGAAGCGCTCCTGACGTCAATAACTGTTTATGTGGGAAATATGTCATTCTACACAACAGAAGAGCAAATTTATGAACTATTTTCCCGAGCTGGAGAAATTAAGAAAATTATTATGGGATTGGATAAAAACGCAAAAAATCCCTGTGGCTTTTGTTTTGTTTTATATTACTCTCGCGAAGATACTGAGGATGCTGTTAAATACATAAGTGGGACAATACTTGATGATCGTCCTATTCGTGTAGATTTTGACTGGGGCTTCCAGGATGGAAGACAATGGGGTCGTGGTCACAGTGGTGGCCAGGTTCGTGATGAATATCGGACTGATTATGATCCTGATATCCTTTTAGATGTTTATGTTTCATTTTATTGCAATTTTTTCCTTTATAAAACAATGAAAATGACATTCATACTAAAGTAA 498 0.3675 MALLFKDLSRLSAYRDRRFPGTQEEFEEALLTSITVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNAKNPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGHSGGQVRDEYRTDYDPDILLDVYVSFYCNFFLYKTMKMTFILK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3246 165 SMART rrm1_1 35 108 IPR000504 GO:0003723
Bisa02g3246 165 CDD RRM_NCBP2 36 113 IPR034148 -
Bisa02g3246 165 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 139 IPR027157 GO:0000339|GO:0005846|GO:0045292
Bisa02g3246 165 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
Bisa02g3246 165 Gene3D - 5 140 IPR012677 -
Bisa02g3246 165 SUPERFAMILY RNA-binding domain, RBD 26 137 IPR035979 GO:0003676
Bisa02g3246 165 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Bisa02g3246 165 FunFam Nuclear cap-binding protein subunit 2 4 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3246 Bisa-ChrBisa02 81781024 81783102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3246 27 107 Eukaryotic Initiation Factors Gene Family AT2G36660 30.488 9.87e-07 45.8