Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3241 ATGGGAAAAGGGGGGCTGGTGAATACGTGCTCTCTGTGGATCATGCGAAACCCAACAATGGCTGTGAAGGACAGGCTAGCTCTGAAGAACAATAAGCCTAACAATGCCAAGGATGTACACTATCGGGGCGTCCGCAAGAGGCCTTGGGGTCGTTATGCCGCCGAAATCCGAGATCCGGGGAAGAAGAGCCGCGTCTGGCTCGGCACCTTCGACACGGCGGAGGAAGCCGCTAGGGCCTACGACGCTGCCGCCAGGCAGTTCCGCGGCCCCAAGGCGAAGACCAACTTCCCCTTGCCTAACGACGGCGTTCTCAACCAGAGCCCTAGCGAGACCAGCACCGTCGAATCCTCCAGCCGGGACGGCCCCGAGCGTGAGGTCACGCGCCGACGCGACGTTGGTGTTGTTGTGGATCGCTTCCCGTTTCTTCCGATTCAGCCTCATCACATGGCGTTTGGTGGTGGTGTTGCCGGCGGCAGTGTCGCGGCTGGTATGGTAGCTCCGTCGCGTCCGGTTTTCTTCTTTGAACCAACTGGTGGGGCTGGTAGGGCCGAATTTGTGGGTCAGAGCTATCCGGTGCGGTTCGAGCTGGCTCCGGTCGAGGTTCCTGCCAAATTGGGTAGTGGGTCGCAGAGTGACTCGGATTCGTCCTCCGTCGTCGATTGTCAGCCTAAAAAACCGATCAATCTTGATCTTAACCTCGCTCCTCCAATGGACGATTGA 720 0.5903 MGKGGLVNTCSLWIMRNPTMAVKDRLALKNNKPNNAKDVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKAKTNFPLPNDGVLNQSPSETSTVESSSRDGPEREVTRRRDVGVVVDRFPFLPIQPHHMAFGGGVAGGSVAAGMVAPSRPVFFFEPTGGAGRAEFVGQSYPVRFELAPVEVPAKLGSGSQSDSDSSSVVDCQPKKPINLDLNLAPPMDD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3241 239 FunFam Ethylene-responsive transcription factor 2 39 98 - -
Bisa02g3241 239 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Bisa02g3241 239 MobiDBLite consensus disorder prediction 206 222 - -
Bisa02g3241 239 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Bisa02g3241 239 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Bisa02g3241 239 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Bisa02g3241 239 MobiDBLite consensus disorder prediction 99 116 - -
Bisa02g3241 239 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Bisa02g3241 239 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Bisa02g3241 239 MobiDBLite consensus disorder prediction 203 239 - -
Bisa02g3241 239 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
Bisa02g3241 239 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 218 - -
Bisa02g3241 239 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Bisa02g3241 239 MobiDBLite consensus disorder prediction 91 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3241 Bisa-ChrBisa02 81698044 81699133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3241 37 239 AP2-EREBP Transcription Factor Family AT5G44210 48.325 7.94e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa02g3241 AP2 1.1e-15 CL0081