Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3233 ATGGATGCTGCCAAAACGGACGCGTTTAAGCCGATAATGGCGAAAGAGAAGACAGTTGAGAGAGAGGCGGCGGAGGATTACAAGGAGAAAAATGGGTTGTCGGAGGAGGATGAGAAGAAGACAGGGGGATCTGGGAAGAAAGGATCCGCTGCCAGGCGGTGCTGCCAAGCGGAGAACTGCACCGCCGATCTCAGCGACGCTAAGCTCTACCATAGGCGGCACAAGGTGTGTGTGTATCATTCCAAGGCTCAGGTAGTGCTTGTGGGTGGCATACGACAGCGCTTTTGTCAGCAATGCAGCAGGTTCCATGAGCTAGCTGAATTTGATGACACAAAAAGAAGTTGTCGTAGGCGTTTGGCTGGACACAATGAAAGGCGAAGAAAGAACTCCGAGTCTCAATTGGAAGTCTCAAGCCCGCAAAGGGCCAGGCACGCAGTTGAAGGACACTGCTTGTGGTAA 459 0.5251 MDAAKTDAFKPIMAKEKTVEREAAEDYKEKNGLSEEDEKKTGGSGKKGSAARRCCQAENCTADLSDAKLYHRRHKVCVYHSKAQVVLVGGIRQRFCQQCSRFHELAEFDDTKRSCRRRLAGHNERRRKNSESQLEVSSPQRARHAVEGHCLW 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3233 152 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 130 IPR044817 GO:0003677
Bisa02g3233 152 MobiDBLite consensus disorder prediction 122 152 - -
Bisa02g3233 152 MobiDBLite consensus disorder prediction 1 52 - -
Bisa02g3233 152 SUPERFAMILY SBT domain 54 133 IPR036893 GO:0003677|GO:0005634
Bisa02g3233 152 MobiDBLite consensus disorder prediction 1 45 - -
Bisa02g3233 152 ProSiteProfiles Zinc finger SBP-type profile. 52 129 IPR004333 GO:0003677
Bisa02g3233 152 Gene3D - 45 116 IPR036893 GO:0003677|GO:0005634
Bisa02g3233 152 Pfam SBP domain 55 128 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3233 Bisa-ChrBisa02 81539515 81540669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3233 45 130 SBP-box Gene Family AT1G53160 66.667 6.99e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa02g3233 SBP 1.7e-31 No_clan