Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3223 ATGAAGTACATCCAACAACTGTGGTGGACAAAGGGAAAAGAGCCAGAGCTGTTCCATTTTCATCTTCTCGTTTTCCTCCTCCTTATATCAATCCAACTGCAGATATCCGCTGGACTTGATTCTATTTTTGCTGGCTCAACTCTATCTGGTCATGGCACCATAAAATCAAAAGAAGGAGTATTTGAAATGGGTTTGTTCTCACCAGGTAATAACAAATACTTCTTAGGCATATGGTACAAAGATCTCCCACTCCCTGAAAAAACAGTGGTCTGGGTAGCCAACAGAGAACAACCCATATCTGATCCAAACTCTACATCCTTGGAATTTGGTGAAGGTGGTGCAAAGTTAGGATATGATAACCATACTAGTATTGCAACAACATTGGTTTCCTGGAAAGATAAAAATGACCCATCTCCTGGATTCTTCTCTGCTGAGTATTTCTGCGGTGAGACAGAAGTTTTGCGCAGGAATGGATCTACGAAACTCTGGATACATTATGAGCCTGAAATGAATTACATTGTAGTGCATGACTTCTCAACTTACATGGTGTTGTCTGTTATGCCTAACTCAGGGTTGTATAGATATGTGCTGGATGTAACAGGACAGATCAAACTACTTGCATGGTGGGAGGGTTGCAGCAAACCAGACAAGTTCTTTGTCTTGCCCAGAATACGATATCCTGGAGGATCGATGTTAATAGAAGCCAAGAATTCTGATGAGTGCCAATGGGCATGCTTAGCTGACTGGTCTTGTGTGGCTTATGCATATGTTAACATATGCTCAATTTGGAAGAACTCTTTTGCAAATATACAACTCTTTTCATCAGATGAGGAGATTGGAGGAGATTTTTATGTTCGACTTGCAGCATCTGAGATAGAGGAAAGAAGGAACAAGAGAGTTACTTGGGTGATTATAGTTGTGGTGCTTATTTCTCTTGCAGGCTTCTTTATTATGCTCAATAATGTGGAGGAAATTGCATGGAGGCTCCTTGGAAGCAATAGAGGGGAACTCCCCAGTTCAACTTTGGTTGGAGTGAAACAACTTAAAGGTCAAATGTATGGAGATAAGCAGCTTCGAGCCGAAATCAACACAATCGGACTAATCCAGCATAAAAATCTCATTCGCCTAAGAGGATTTTGTTTAGAACATTCAGAAAGATTCTTGGTGTATGATTACCTGCCAAATGGTTCTCTAGGATCTCATCTATGCCAAGGGGGGATTGGTATTTTGGATTGGGCTAAGAGATACAATATTGCACTTGGGACTGCAAAAGGACTAGCTTACCTACATGAATCATGTAGAGACTGCATTATCCATTGTGATGTCAAACCAGAGAACATTTTGTTGGATGCTGACTTTAGTCCAAAAGTTGCTGATTTTGGCCTTGCTAAGCTCTTAGGCCGAAACTTCAACAAGGTTCTTACTACCATGAGAGGAACTAGAGGCTATCTCGCACCGGAATGTTTTTCAGGCGAAGATATCACTGCAAAAGTTTATGTATACAGCCACGGGCAGGTGTCCCTCCCAATTCCGAAGTATTTTCAGTCCCTTGCAGATGGTTTCATAAAAACAAGTGATATCATGGAAAGTGAAGTTTATAGTACATCTAGCTCTCTTCCTATTGGTTTAACCAATCAACTGCCAGTGCAGCCTAATCTCCATATGTCACAGTATAATTGA 1680 0.4101 MKYIQQLWWTKGKEPELFHFHLLVFLLLISIQLQISAGLDSIFAGSTLSGHGTIKSKEGVFEMGLFSPGNNKYFLGIWYKDLPLPEKTVVWVANREQPISDPNSTSLEFGEGGAKLGYDNHTSIATTLVSWKDKNDPSPGFFSAEYFCGETEVLRRNGSTKLWIHYEPEMNYIVVHDFSTYMVLSVMPNSGLYRYVLDVTGQIKLLAWWEGCSKPDKFFVLPRIRYPGGSMLIEAKNSDECQWACLADWSCVAYAYVNICSIWKNSFANIQLFSSDEEIGGDFYVRLAASEIEERRNKRVTWVIIVVVLISLAGFFIMLNNVEEIAWRLLGSNRGELPSSTLVGVKQLKGQMYGDKQLRAEINTIGLIQHKNLIRLRGFCLEHSERFLVYDYLPNGSLGSHLCQGGIGILDWAKRYNIALGTAKGLAYLHESCRDCIIHCDVKPENILLDADFSPKVADFGLAKLLGRNFNKVLTTMRGTRGYLAPECFSGEDITAKVYVYSHGQVSLPIPKYFQSLADGFIKTSDIMESEVYSTSSSLPIGLTNQLPVQPNLHMSQYN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3223 559 Gene3D - 35 205 IPR036426 -
Bisa02g3223 559 SUPERFAMILY Protein kinase-like (PK-like) 334 507 IPR011009 -
Bisa02g3223 559 Pfam PAN-like domain 212 269 IPR003609 -
Bisa02g3223 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Bisa02g3223 559 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3223 559 CDD PAN_AP_plant 212 288 - -
Bisa02g3223 559 FunFam Protein kinase superfamily protein 393 465 - -
Bisa02g3223 559 ProSiteProfiles Bulb-type lectin domain profile. 39 167 IPR001480 -
Bisa02g3223 559 SMART blect_4 45 169 IPR001480 -
Bisa02g3223 559 Pfam Protein kinase domain 342 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3223 559 Gene3D Phosphorylase Kinase; domain 1 332 392 - -
Bisa02g3223 559 Gene3D Transferase(Phosphotransferase) domain 1 393 510 - -
Bisa02g3223 559 SMART ntp_6 213 287 IPR003609 -
Bisa02g3223 559 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 129 IPR036426 -
Bisa02g3223 559 ProSiteProfiles PAN/Apple domain profile. 212 288 IPR003609 -
Bisa02g3223 559 PANTHER OS07G0415500 PROTEIN 22 122 - -
Bisa02g3223 559 SMART serkin_6 316 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3223 Bisa-ChrBisa02 81371029 81373580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3223 334 510 Receptor kinase-like Gene Family AT5G20050 46.524 3.45e-44 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa02g3223 Pkinase 1.4e-32 CL0016