Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3219 ATGCCCAGTAGTGTAGTATGTATTATTGTACTCAGCTTTCTCAGTTTCATCGCTTTACATTGCACTGCCCAGCTCGCACCTGGTGAATTAAGATTGATGCTCGCGGTGTCACCTTTAAGGAGAAGCAGAGATGAAAGCGGAGGAGAGATGGAAGGCTTCTCGATGGTCGGCGCCGGTGCCGGAGACGATGAGTTTGGGGAATTTTCCGATGGGAATTTATTGGAAAGCATCAATTTTGAGGATCTTTTTGTGGGCATCAACGTCGACGGAGATATGTTGCCGGATTTGGAGATGGACCCTGAAATCCTCGCTGAGTTCTGCGCGGAGTCGCCGGAGAACATGAAGTACTCCTCGGTTTCAGGGGAAAATAATGATAAAATTACTAACGATAAAGTGGTTGGTGATCAGAATAATGTTGTTATAAGTATGAAGAAAGTAGAAGAAGACGAAGATTATGGTAATAGAGTTTCTTCGGCTTCAAATTCTGGATCGAGTCGTGGAGGAGAGGAATCACCGACGACGGTGAAGAGGTCGCCGAAGCAAGGTGACAAAGGAAGAAAATCGTCGTCTGTTCAGTCCCAAAATTCTCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACACCAGACTTGCACAGAAGATTCGTGCAAGCAGTGGAGCAGCTAGGAGTGGACAAGGCAGTGCCTTCCAGGATTTTAGAGGTTATGGGAATTGATTGTCTAACACGCCATAACATCGCCAGCCATCTCCAGAAATATCGATCGCATAGGAGGCATTTGCTGGCGCGTGAAGCAGAAGCAGCGAGGTGGAGTCAGAGAAGGCAGATATGTGGAGGGAGAAAAGAGGTTAGCCCATGGCTTGCACCACCCCCACCAACCTTGGGTTTGCCTCAAATGGTTCCTCCCATGCATCACTTTAGACCCTTACATGTGTGGGGGCATCCCCCCATGGACCACTCCTTCATGCCCATGTGGCCTAAGCATTATCGTCATCTTCCACATCCCCCGCCCGCTTGGGTGCAGCCGGCAGCTCCACCGCCGGACCCTTCATTCTGGTACCCTCACCACCAACAGAGATTTGGATCTCCACCTGTCCCCGGCATCCCACCACCCCATGTCATGTTCAAGGCAGATCCAGGCATCGGCGTCCCCACCGGCCAACCCGGCCCCCGGCCCGTCTTGGACTTCTACCCGTCAAAGGAGAGCATAGATGCAGCAATTGGAGATGTTTTATCAAAACCATGGATGCCACTTCCTCTGGGCCTCAAGGGTCCAGCGCTTGATACTGTGTTGGCTGAATTACAGAGACAAGGGATTCCAAAAATTCCACCCTCTTCTGCTTGA 1341 0.5056 MPSSVVCIIVLSFLSFIALHCTAQLAPGELRLMLAVSPLRRSRDESGGEMEGFSMVGAGAGDDEFGEFSDGNLLESINFEDLFVGINVDGDMLPDLEMDPEILAEFCAESPENMKYSSVSGENNDKITNDKVVGDQNNVVISMKKVEEDEDYGNRVSSASNSGSSRGGEESPTTVKRSPKQGDKGRKSSSVQSQNSQGKRKVKVDWTPDLHRRFVQAVEQLGVDKAVPSRILEVMGIDCLTRHNIASHLQKYRSHRRHLLAREAEAARWSQRRQICGGRKEVSPWLAPPPPTLGLPQMVPPMHHFRPLHVWGHPPMDHSFMPMWPKHYRHLPHPPPAWVQPAAPPPDPSFWYPHHQQRFGSPPVPGIPPPHVMFKADPGIGVPTGQPGPRPVLDFYPSKESIDAAIGDVLSKPWMPLPLGLKGPALDTVLAELQRQGIPKIPPSSA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3219 446 MobiDBLite consensus disorder prediction 114 133 - -
Bisa02g3219 446 NCBIfam myb-like DNA-binding domain, SHAQKYF class 201 255 IPR006447 GO:0003677
Bisa02g3219 446 Pfam Myb-like DNA-binding domain 204 253 IPR001005 -
Bisa02g3219 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 257 IPR017930 -
Bisa02g3219 446 SUPERFAMILY Homeodomain-like 199 257 IPR009057 -
Bisa02g3219 446 MobiDBLite consensus disorder prediction 155 175 - -
Bisa02g3219 446 PANTHER TRANSCRIPTION ACTIVATOR GLK1 33 445 IPR044825 GO:0003700|GO:0045893
Bisa02g3219 446 MobiDBLite consensus disorder prediction 185 201 - -
Bisa02g3219 446 FunFam Two-component response regulator 197 260 - -
Bisa02g3219 446 Gene3D - 198 259 - -
Bisa02g3219 446 MobiDBLite consensus disorder prediction 144 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3219 Bisa-ChrBisa02 81294151 81298276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3219 66 397 G2-like Transcription Factor Family AT5G44190 41.737 2.43e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa02g3219 Myb_DNA-binding 8.9e-08 CL0123