Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3218 ATGGGTGCGGACTATTACAAGATCTTGCAGGTTGATAAGAATGCCAAAGAGGACGACTTGAAGAAGGCTTACAGGAAGCTGGCCATGAAATGGCATCCCGATAAGAATCCCAATAACAAGAAAGAAGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCCTATGATGTTCTCAGTGATCCTCAGAAGAGAGCTATCTATGATCAATATGGCGAAGAGGGCTTGAAGGGTCAGGTTCCCCCGCCCGATGCCGGTGGAGCTTCTTTCTTTTCGTCGGGAGATGGGCCGACGTCGTTTCGGTTCAATCCCCGGAGTGCCGACGACATTTTTGCGGAGTTTTTTGGGTTCTCTAGTCCGTTTGGAGGCATGGGCGGGATGGGTGGAGGAGGTAGTGGTCCTGGGATGAGGTCGAGGTTCTCTAGTGGGATTTTTGGTGATGATATGTTTGGATCATTTGGGGAAGGAGGAGGAGTCCATATGCATCCAGGTGTTCCTCGCAAAGCTCCTCCTATTGAGAACAAATTACCATGTAGTCTCGAAGACTTATACAAAGGGACCACAAAGAAGATGAAGATCTCTAGAGAAATTGCCGATGCCAGTGGCAAAAGAAATAATGTGGAGGAGATCCTAACTATTAATATCAAGCCTGGCTGGAAAAAGGGTACAAAGATAACCTTTCCAGAGAAGGGGAATGAGCAGCCGAACGTGACACCCGCGGACCTTGTGTTCGTCATTGATGAAAAACCTCACAGCGTGTTCACTCGAGATGGAAACGATCTAATTGTGACACAGAAGATATCTCTAGCAGAGGCCTTAACCGGTTACACGGTGCAGCTGACCACCCTGGATGGAAGAAGCTTGACCATACCAATCAACAATGTGATCCATCCAAACTATGAGGAGGTGGTTGCAAGAGAAGGAATGCCACTCCAAAAGGATCCAACAAAGAAGGGGAACTTGAGGATTAAGTTCAACATTAAGTTCCCAACTCGGCTTACTTCAGAGCAGAAGGCAGGAATCAGGAAACTTTTGGGTGCCTCACCCTGA 1044 0.4732 MGADYYKILQVDKNAKEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYDQYGEEGLKGQVPPPDAGGASFFSSGDGPTSFRFNPRSADDIFAEFFGFSSPFGGMGGMGGGGSGPGMRSRFSSGIFGDDMFGSFGEGGGVHMHPGVPRKAPPIENKLPCSLEDLYKGTTKKMKISREIADASGKRNNVEEILTINIKPGWKKGTKITFPEKGNEQPNVTPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGYTVQLTTLDGRSLTIPINNVIHPNYEEVVAREGMPLQKDPTKKGNLRIKFNIKFPTRLTSEQKAGIRKLLGASP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3218 347 SUPERFAMILY Chaperone J-domain 4 124 IPR036869 -
Bisa02g3218 347 SMART dnaj_3 3 62 IPR001623 -
Bisa02g3218 347 CDD DnaJ 4 59 IPR001623 -
Bisa02g3218 347 PRINTS DnaJ domain signature 6 24 IPR001623 -
Bisa02g3218 347 PRINTS DnaJ domain signature 62 81 IPR001623 -
Bisa02g3218 347 PRINTS DnaJ domain signature 42 62 IPR001623 -
Bisa02g3218 347 PRINTS DnaJ domain signature 24 39 IPR001623 -
Bisa02g3218 347 Gene3D DnaJ domain 2 123 IPR036869 -
Bisa02g3218 347 Pfam DnaJ C terminal domain 170 328 IPR002939 -
Bisa02g3218 347 Gene3D - 249 329 - -
Bisa02g3218 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 337 IPR008971 GO:0006457|GO:0051082
Bisa02g3218 347 CDD DnaJ_C 168 331 - -
Bisa02g3218 347 Gene3D - 169 247 - -
Bisa02g3218 347 Pfam DnaJ domain 4 67 IPR001623 -
Bisa02g3218 347 FunFam Dnaj homolog subfamily b member 166 247 - -
Bisa02g3218 347 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 343 - -
Bisa02g3218 347 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Bisa02g3218 347 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Bisa02g3218 347 FunFam DnaJ subfamily B member 13 249 329 - -
Bisa02g3218 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 259 IPR008971 GO:0006457|GO:0051082
Bisa02g3218 347 MobiDBLite consensus disorder prediction 72 91 - -
Bisa02g3218 347 FunFam DnaJ subfamily B member 13 3 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3218 Bisa-ChrBisa02 81213744 81216903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3218 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 5.59e-10 58.9