Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3217 ATGGAGGCCGGTTCGGAAGGAGAGAAGAAAAAGCCACCTGAGGGAGAGAACAAGACCAAGCGCAAAATGAAGACTGCTTCCCAGTTGGAGATTCTGGAGAAAACATATGCTACTGACCCGTACCCCTCCGAGGCTTTGCGAGCAGACCTGTCGGTGAAATTGGGTCTTTCGGATCGTCAACTGCAGATGTGGTTTTGTCACCGTAGGTTAAAGGACAGGAAGGCACCGGCGGCCAAGAAGCCGCGAAATGATTCACCACCTGGAGCGGCGACTCCGGCTCCAGTGGGTAATAGTGTTGAGCATATGGTCATGGGTGACACCGGGCATGAGCTTGGTTCTATTTCTGGGTTGAGGCCATTCAGTCATATGGATTCACGGAGAGTTGTTCCACGACCTGGGATGGCCTTTACTAGGATTGGAGGGGGATTGCCAGCAATGGAGAGTTACTATGAATCACGTCAGTCCATGGCTGAGCTGAGAGCTGTTGCATTCGTGGAAGCACAGTTAGGGGTGCCATTAAGGGAGGACGGGCCAATTTTGGGGATGGAATTTGATCCCTTGCCACCGGGTGCTTTTGGTGCACCAATAGGCCCAAGTACAATGGGGCAGCATAGGCAGTTGGGAAGGCCTTTTGAGGCAAAAATTTATGAACGATTAGATAAGGGTGTTTCAAGAACTCTCCATGAATATCAGTTCATTCCGGAGCAGCCGACTGTTAGAAAGGAGACATATGACTATGAGAGGATTGCCCCTTCTAACCACTACAGTTCTCTTGACGGTATTCCACATGCAAGGACTTTACTCTCTAGCGGGCAACCACTCCTTAATGGGCATGAAACTGCTTCCCATGGATATGGATATCAAGGTCAGATGCCTGGGTTAAATCTCTTATCTCAGCAAGCCAAGCAGAATCTTTTAACTTCTGCTTCGGGAGAGATTGATAATGTTACAAGGAAGAACCCTTTTACTGATGTGCCTATTGACACACATATCGGGGCTCACCCAGTTACTCAGACTGACAGTACATTAATGCCATCTGACAAGAAGGTTGTCCATGAGGAGGAAATTTCACGGTTTCAGAGGAAGCGAAAGAGTGAAGAGGCTAGAATGCAACGGGAACTTGAGGCACAAGAGAAAAGATTCAGAAAAGAGCTTGAAAAACAGGATATTTTAAGGCGAAAGAGAGAAGAGCAAGTAAGGAAAGAGATGAAGAGGTATGAACGTGAAAGGCGGAAGGAAGAGGAAAGGCTATTGCGTGAAAGACAGCGAGAGGAGGAAAGATACCAAAGAGAACAAAGGCGTGAACTGGAGCGGAGGGAGAAGATTTTGCAGAAGGAGTCAATCAGAGCTGAGAAAAGGAAACAGAAGGAAGAATTACGCAGAGAGAAAGAGGCAGCAAAGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGCAGGATGGCCAAAGAATCAACGGAACTAATTGAAGATGAACGACTGGAAATGATGGAGTTGGCTGCATCAGATAAGGGGCTTTCTTCAATTCTGTCTCTTGACTATGAAACTTTGCAGAATCTTGAATTATTTAAAGATAGGAGGACTTCATTTCCACCTGAGTCTGTACTGTTGAAAAGACCTTTCTCAATTCAACCTTGGTTGGGTTCTGAGGAGAACATAGGAAATCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTGCAGATGTTCTTGGGATATGGCCATTCACTTTGGATGAATTTGTACAAGCTTTCCATGATCATGATCCAAGGTTGTTAGGTGAGATTCATATTGCTCTTCTGAGATCCATTATAAAAGATATTGAAGATGTTGCAAGAACACCTACTGGGGTAGGAGCTAATCATAACAGTGCTGCCAACCCTAGTGGGGGTCATCCACAAATAGTTGAAGGGGCTTATTTGTGGGGGTTTGATATAAGAAATTGGCAGCGACACTTAAATCCATTGACATGGCCTGAGATTTTGCGGCAGTTTGCTTTGTCAGCTGGATTTGGGCCACAATTGAAGAAAACAAATATTGAGCAGGTGTATCCTTTTGACAACAATCAGGGTATTGACGGTAAAGATATAATTTCTAATCTGCGCAGTGGAGCTGCAGTTGAAAATGCTTTTGCTATCATGCAAGAAAGGGGATTATCTAATCCAAGAAGAGCTAGGCATCGCTTGACACCTGGTACTGTTAAGTTTGCAGCATTTCATGTCCTGTCACTTGAAGGAAGCAGGGGCCTTACCATATTGGAAGTTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTTCAACGAGCAAAACACCAGAGGCTTCTATAGCTGCTGCTTTGTCCAGAGACACAAAGCTTTTTGAAAGGACAGCTCCTTCAACATATTGTGTACGTCCTGCGTATAGAAAGGACCCAGCTAATGGTGAGGCAATCCTCTCAGCTGCGAGGGAAAGAGTCAGGATATTCAAAAATGGATTTGTTGATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCTGAAATTGATATGGCAGAGGATCCTGAGGTTGATGATTTAGGTACCAAAACAAATAACAAGGAGGCTCCCAACTTGGTGGAATCTAGTTCAAACACTGTAGTTAAGAGTAGAGAGGATAGTAGTGAAATTTTGGAAAGTCCTGATGGTGCCCATGGGCAAATGAAGGAGGATTTAGCTTCAATTGTTGCTGAAGGATTTAGTCAGGAAATTGCTGGTAGTAGCAATGATGTGGCTAATCCTGACCTGGAAGACACTGGTATCGATGAAAGTAATCCAGGTGAATCATGGGTTGAAGGGCTTATGGAAGCAGAGTACTCAGATCTTAGTGTTGAGGAGCGACTTAATGCTCTTGTTGCTTTGATTGGTGTAGCAATTGAAGGAAATTCAATTCGTGTTGTTCTTGAGGAACGTCTAGAAGCAGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGTACAGCTTGATAGACACCGAATCAAGGAGGACTACTATTTTAAGATTCAGTCTCTCCCTTATATGGGCAACAAGAATGAACTAACTCTTACAAGTCCATCAGTAGAGAGTAAACAGAGCCCTTTGCTAAATGCTGATGACAAAAATGACAAAGCATTACTTACTCCCTTTGATCAGCAAGTACAGCTAAATGCTCTACAGGACAATCAGACCAAACTCCGGAGTGTCCTATCAGAAGTTAACGTGCAAATGCAAGATTCTGTTGTCCCCGATAATTATTCTTACCAACAATATGGATATGGTGCTGAAAAGTCAAGGTCAAATTTCAAATCATACATTGGTCACTTGGCAGAAGAAACTTTTATGTATAGGTCATTGCCTCTTGGTTTCGATCGGAGACGTAATCGATACTGGCAGTTCATTACATGTGCTTCTCATAATGAGCCAGGCTGTGGCAGGATTTTCGTGGAGTTGCATGATGGTCATTGGAGGCTGATTGATTCAGAAGAGGGTTTTGATGCCCTCTTGGCATCATTGGATGTACGTGGGATCAGGGAATCCCATTTGCACATGATGTTGCAAAGAATTGAGATGCCCTTCAAGGAATCTGTTAGAAGGAATAACATGAGAAGGCAAAATGGAGACACTGTCAATACAGAAACTTCTCAAATAGGCTTAGAGAACGACTACAGTGCTTCTATGTGCATTGCTAATTCAGATATGTCAGAGACCTCGACATCTTTTGTGGTTCAGCTTGGGAGGAATGATTCTGATAACAAGGATGCTATAAGGAGATATCAGGACTTCGAAAAATGGACGTTGAAGGAATGCCTAAATTCCTCAGTATTATGTGCAATGAAGTTTCGGATGAAGAGGTGCAGCCAATTGCTGGGCATGTGTAATTACTGCCACAAAATATATTTATCTGAAGAAACGTCTTGTCCTTCCTGCGATAGAACATTTCTTACCTGTAAGAGTAACTTATACTCTTCTGAACATATGGCTCACTGTGTAGAGAAAATGAAGATTGCCGCTGACTATACATACCCACCCTCTTGTCCTTTGAGGATGAGATTGCTCAAATTGTTACTGTCAATTGTTGAGGTTTCCATTCCTGAAGAAGCACTCAAACCTCTTTGGACAGAAAACTATCGAAGGTTTTGGAATACAAAGCTGCATGCTTCATCAACTGAAGACCTTCTTGAGATATTGACTATACTGGAGGGTGCCATAAAGAGGGATTATTTGGCTTCAAACTATAAGACTACTAGTGAGCTGTTGAGTTCCGTTATTTCTTCTGGATGTCATGATGATTCGATGGGTGCTGAAAGAACTCCTGTACTGCCATGGGTGCCTCATACAACTGCTGCTGTGGCACTAAGGCTCATGGAACTTGACATGTCTACCTTTTACACCTTAGAGCAGAAGCTAGAGTCTGAAAAGGACAAGACAAATGGGGATATTATGAAGTTTCCTTCAAAATATGCTGCTGCCAAGAATTCCCAAAATGCTGGTGTGGCCAAAACGTCTCACATGGCTGGGCATAACTTGGTTGATCTAGGAGCTGGATTTGCAAGCTACAGTCGAGGACAAAGGTCCTGTGGACAGGGCCGAGGTCGTTCTCGTGGTGGGAGATCACAGAGAAGGGTCATTAATTCAAGATCTGAATCTAGAAAGAAAGTTGCTGCCACTAGCAGGAGGCTTGGACAGGTGTTAAGATGGACAGGAAAACCACGTGGATGTGGAGGGCATCTCCGTGCTTGTCGAAGCATTAGAAGTAGCAGGCAGAAGCCATCAGCTAGGGTGCTTGAGATCAGTGTCGAGAGGGATGCTCCCAGAGAGGAACCAGCTGGTGATTTTGTCAGGGAGGAAACCAATCAAGCCGATACCCTTGGTTTTCAAATGGAAGCAGCCGAAAATGTAAGCAGTTCAGGAAGATCAGATTATGAGGAAGATAATTATCAAATAACAGGTGATGAGTATGATTATCTGATGGATAATAATGAAGATGGCTACGGTGGTGGATTTAGCGGGAAGTCTGTAGATGGGAGTGATTATAATGTAGAAGATGAGGATGAATATGAGGATGACGGGCAGGTTGATGTTGATGTTGAGGACTTCATAAATAGGGATTCAGATATAGGGGAGAACGGAGAAGATGCAGAGCAAAACATGGACCCGGATGGATTGAATTCTACATCCTCAGAGTACAGTGATTAA 5193 0.4383 MEAGSEGEKKKPPEGENKTKRKMKTASQLEILEKTYATDPYPSEALRADLSVKLGLSDRQLQMWFCHRRLKDRKAPAAKKPRNDSPPGAATPAPVGNSVEHMVMGDTGHELGSISGLRPFSHMDSRRVVPRPGMAFTRIGGGLPAMESYYESRQSMAELRAVAFVEAQLGVPLREDGPILGMEFDPLPPGAFGAPIGPSTMGQHRQLGRPFEAKIYERLDKGVSRTLHEYQFIPEQPTVRKETYDYERIAPSNHYSSLDGIPHARTLLSSGQPLLNGHETASHGYGYQGQMPGLNLLSQQAKQNLLTSASGEIDNVTRKNPFTDVPIDTHIGAHPVTQTDSTLMPSDKKVVHEEEISRFQRKRKSEEARMQRELEAQEKRFRKELEKQDILRRKREEQVRKEMKRYERERRKEEERLLRERQREEERYQREQRRELERREKILQKESIRAEKRKQKEELRREKEAAKIKAANERAIARRMAKESTELIEDERLEMMELAASDKGLSSILSLDYETLQNLELFKDRRTSFPPESVLLKRPFSIQPWLGSEENIGNLLMVWRFLISFADVLGIWPFTLDEFVQAFHDHDPRLLGEIHIALLRSIIKDIEDVARTPTGVGANHNSAANPSGGHPQIVEGAYLWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKTNIEQVYPFDNNQGIDGKDIISNLRSGAAVENAFAIMQERGLSNPRRARHRLTPGTVKFAAFHVLSLEGSRGLTILEVADKIQKSGLRDLSTSKTPEASIAAALSRDTKLFERTAPSTYCVRPAYRKDPANGEAILSAARERVRIFKNGFVDAEEPDDGERDDDSEIDMAEDPEVDDLGTKTNNKEAPNLVESSSNTVVKSREDSSEILESPDGAHGQMKEDLASIVAEGFSQEIAGSSNDVANPDLEDTGIDESNPGESWVEGLMEAEYSDLSVEERLNALVALIGVAIEGNSIRVVLEERLEAANALKKQMWAEVQLDRHRIKEDYYFKIQSLPYMGNKNELTLTSPSVESKQSPLLNADDKNDKALLTPFDQQVQLNALQDNQTKLRSVLSEVNVQMQDSVVPDNYSYQQYGYGAEKSRSNFKSYIGHLAEETFMYRSLPLGFDRRRNRYWQFITCASHNEPGCGRIFVELHDGHWRLIDSEEGFDALLASLDVRGIRESHLHMMLQRIEMPFKESVRRNNMRRQNGDTVNTETSQIGLENDYSASMCIANSDMSETSTSFVVQLGRNDSDNKDAIRRYQDFEKWTLKECLNSSVLCAMKFRMKRCSQLLGMCNYCHKIYLSEETSCPSCDRTFLTCKSNLYSSEHMAHCVEKMKIAADYTYPPSCPLRMRLLKLLLSIVEVSIPEEALKPLWTENYRRFWNTKLHASSTEDLLEILTILEGAIKRDYLASNYKTTSELLSSVISSGCHDDSMGAERTPVLPWVPHTTAAVALRLMELDMSTFYTLEQKLESEKDKTNGDIMKFPSKYAAAKNSQNAGVAKTSHMAGHNLVDLGAGFASYSRGQRSCGQGRGRSRGGRSQRRVINSRSESRKKVAATSRRLGQVLRWTGKPRGCGGHLRACRSIRSSRQKPSARVLEISVERDAPREEPAGDFVREETNQADTLGFQMEAAENVSSSGRSDYEEDNYQITGDEYDYLMDNNEDGYGGGFSGKSVDGSDYNVEDEDEYEDDGQVDVDVEDFINRDSDIGENGEDAEQNMDPDGLNSTSSEYSD 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3217 1730 Coils Coil 396 476 - -
Bisa02g3217 1730 Pfam HB1, ASXL, restriction endonuclease HTH domain 730 797 IPR007759 GO:0006355
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 1694 1708 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 1656 1730 - -
Bisa02g3217 1730 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Bisa02g3217 1730 Gene3D - 9 88 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 1677 1693 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 72 97 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 1520 1555 - -
Bisa02g3217 1730 SMART HOX_1 17 79 IPR001356 GO:0003677
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 325 349 - -
Bisa02g3217 1730 CDD homeodomain 18 74 IPR001356 GO:0003677
Bisa02g3217 1730 SUPERFAMILY Homeodomain-like 13 74 IPR009057 -
Bisa02g3217 1730 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1115 1187 IPR028941 -
Bisa02g3217 1730 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Bisa02g3217 1730 ProSiteProfiles HARE-type HTH domain profile. 730 799 IPR007759 GO:0006355
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 857 877 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 878 892 - -
Bisa02g3217 1730 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 4 1730 IPR044977 GO:0006357
Bisa02g3217 1730 Pfam DDT domain 550 605 IPR018501 -
Bisa02g3217 1730 ProSiteProfiles DDT domain profile. 549 608 IPR018501 -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 1 26 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 830 848 - -
Bisa02g3217 1730 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 933 975 IPR028942 -
Bisa02g3217 1730 SMART testlast3 549 608 IPR018501 -
Bisa02g3217 1730 Coils Coil 349 387 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 396 431 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 824 892 - -
Bisa02g3217 1730 MobiDBLite consensus disorder prediction 1540 1554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3217 Bisa-ChrBisa02 81201402 81212789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3217 1 1703 Homeobox Transcription Factor Family AT5G44180 47.288 0.0 1356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa02g3217 WSD 4.3e-14 No_clan