Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3215 ATGCTTGTTCACACTTCTCCTTCCTTTCTGCTTCTTCAAATCCCACGCTCTTCCAACTTGCCACTCAACTGGACACTAACAACCTCCTCCTCTTCCACCATGCTTCTCCTCCTTCTCCTTCTCATTCTCTCTCCTCCTCCCCTCACTCTCTCTCTATCCCAAGACGGTCTCTTCCTCCACCAAGCCAAGCTTCGACTCTCCGACCCTTTCAATGCCCTCTCCTCCTGGAATCCCCGCGACGCCTCTCCCTGCGCCTGGTCCGGCGTCACCTGCGACCCAGACTCCGGCGCCGTCACTTCCCTCAACCTCTCCAACGCCCAGCTCGCCGGCCCCTTCCCCTCCGTTCTCTGTCGCCTCCCTTCTCTCGCATTCATCTCCTTCTACAACAACTCGATCAACTCTTCTCTCCCCAATGATATTTCCAACTGTAGCCGTCTCGAGTTTCTCGATCTCTCCCAGAACTTCCTTGTCGGTTCCATCCCGGAGACTCTCTCGCGAATCCCAACTCTCCGGTATCTGGACCTCTCGTTCAACAACTTCTCCGGCGATGTTCCGGCGAGTTTTGGTGAGTTCCGGCGCCTCGAAACTCTTATGGTCCTTTATAATCTGCTGAACGGAACAATACCCGGCTCTCTCGGTAGCATTTCCACCCTGAGATTTCTTGGACTTGCTTATAACCCCTTCGCTCCGAACCCCATACCGGCTGAATTGGGTAACCTGACGAGTATTAAGGAACTGTGGCTCGCTTCGTGTAACTTTGTGGGGTCGATTCCGGAATCGTTGGGCCGTCTCACGACGCTTACGAACCTCGACTTGTCCATTAACGGACTAAGTGGTTCTATTCCGAAATCGATTGTGGGGATGAAAAGCATCGTTCAAATTGAGCTTTTTCAGAACTCGCTGTCTGGCGAGTTACCTTCGGGAATGTCGAACTTGACGAATCTGAGACGATTGGATGCGTCGACTAACAAGTTGACTGGCACCATTCCTGATGAGCTGTGCAGGTTGGAGCTGGAATCTCTTAATCTGTTTCACAATGAACTTGAAGGGTATTTGCCAGAGAGTATAGCTCTGTCTCCGAATTTGTCCGAGCTCAAATTGTTCAACAACACGCTTGGAGGAAAGTTGCCGAGTTCTCTTGGTAATAACTCACGCCTCGTTATTCTAGACGTTTCATATAATCAATTTTTTGGTGAAATACCGGAGAATTTGTGTAGAGGGGGCGGGTTGGAAGAAATGATTATGATATACAATTCATTTTCTGGGAAAATTCCTCAGAGTCTGGGAGCGTGCACGAGCTTAGCCAGGGTTCGTCTAAGGAATAATAATCTCTCAGACATAGTTCCTGATGGTTTCTGGGGTCTACCTCATCTGTATTTTCTCGAGCTCGCTCATAATTCTCTAGCTGGGCAAATTTCTAATGCAATATCTGGTGCTCGTAATCTGTCGGATTTGGTAATTTCGAGTAACCAATTTTCTGGGTCGATACCTGATGAGATTGGGTCGTTGAGTAATCTTGTAGAATTTGATGGCAGCCAAAACAGGCTCACAGGTCAGATTCCGTCCAGTATGATCAAGTTGAGCCAGTTGGGTAAGCTTGATGTGAGTGACAATAAACTTTCTGGTGCTATTCCAGAAGGAATTAGTTCTTGGAATAAGCTCAATGAGCTTAACCTCGCAAACAATAGGTTTGATGGTAAAATTCCAAACGAAATAGGGAGCTTTCCTGTGCTTAATTATCTTGATCTTTCTGGTAATCGGTTCTCTGGTGAAATTCCAACTGAGTTGCAAAATTTGAAGCTCAATTCACTGAATTTGTCAAACAATCAGCTTTCTGGGAACATCCCTCCTCTTTATGATAATGAAAATTATAGGAAGAGTTTTCTAGGAAATTCAGGCCTCTGTGGTGACCTCTTTCGACTTTGTGCAAGTTCTAGTGGAAGTAAGAACCGGAGGTATCTGTGGGTTTTCAGGTCAATATTTGTACTGGCTGGTATTGTTTTTGTTATTGGGGTCGCATGGTTTTACCTGAAATACCGGAACATCAAGAAGTTGAAAAAAGGATTTAACATGTCAAAGTGGAGATCATTTCATAAGTATGGCTTTAGCGAGGTGGAGATTGTTAAATTGCTGAGTGAAGATAACGTAATTGGGAGCGGAGCATCTGGGAAGGTCTACAAAGTAGTGCTTAGTAATGGTGAGGTAGTGGCAGTGAAGAAACTGTGGAGGGCAAATAATAAAGATGGAAGTGCTGGTTTTGAGAAAGATGAATTCGAAGTCGAAGTCGAAACATTGGGAAAGATCCGGCACAAGAATATTGTGAAGTTATGGTGTTGTTGCAACAATGGAGACAACAAGCTACTAGTTTATGAATATATGCCAAACGGAAGCTTGGGTGATATATTGCACAAAAGCAAGAAGAGCTTGCTTGATTGGCCAACCAGGTATAAAGTTGCCATTGATGCCGCTGAGGGACTTTCTTACTTACACCATGATTGTGTCCCACCAATTGTTCATAGGGACGTAAAGTCTAACAATATATTGCTAGATGGAGAGTTCAGTGCGAAAGTTGCAGATTTTGGAGTTGCCAAAATGTTTAGGGGGGCCAACCAAGGCACAGAATCCATGTCTGTTGTTGCAGGATCTTATGGTTACATTGCTCCAGAATATGCCTACACTCTTCGGGTAAACGAAAAGAGTGATATCTACAGCTTTGGCGTGGTTATTCTGGAATTGGTAACAGGGAGACCCCCAATTGATTCAGCTTATGGAGAAGAAGATTTGGTGAAATGGGTTTCCTCCACATTGAATCAGAAAGGTATAGACCAGGTGATTGATCCCTGTCTTGATTCCAAATACAAAGAAGAAATAAGCAAAGTGCTAAGTGTGGGGCTTCTCTGCACAAACGGTTTTCCCATAACCCGACCTTCCATGCGTAGAGTGGTGAAAATGCTGCAGGAAGCTTCTGCAGATGCCAAATCCAGAGGTGGGAAGAAGGATGGAAAACTCTCCCCTTATTATCAGGAAGAGCCCTGTAATCAAGGAAGCACAGTTTGA 3057 0.4544 MLVHTSPSFLLLQIPRSSNLPLNWTLTTSSSSTMLLLLLLLILSPPPLTLSLSQDGLFLHQAKLRLSDPFNALSSWNPRDASPCAWSGVTCDPDSGAVTSLNLSNAQLAGPFPSVLCRLPSLAFISFYNNSINSSLPNDISNCSRLEFLDLSQNFLVGSIPETLSRIPTLRYLDLSFNNFSGDVPASFGEFRRLETLMVLYNLLNGTIPGSLGSISTLRFLGLAYNPFAPNPIPAELGNLTSIKELWLASCNFVGSIPESLGRLTTLTNLDLSINGLSGSIPKSIVGMKSIVQIELFQNSLSGELPSGMSNLTNLRRLDASTNKLTGTIPDELCRLELESLNLFHNELEGYLPESIALSPNLSELKLFNNTLGGKLPSSLGNNSRLVILDVSYNQFFGEIPENLCRGGGLEEMIMIYNSFSGKIPQSLGACTSLARVRLRNNNLSDIVPDGFWGLPHLYFLELAHNSLAGQISNAISGARNLSDLVISSNQFSGSIPDEIGSLSNLVEFDGSQNRLTGQIPSSMIKLSQLGKLDVSDNKLSGAIPEGISSWNKLNELNLANNRFDGKIPNEIGSFPVLNYLDLSGNRFSGEIPTELQNLKLNSLNLSNNQLSGNIPPLYDNENYRKSFLGNSGLCGDLFRLCASSSGSKNRRYLWVFRSIFVLAGIVFVIGVAWFYLKYRNIKKLKKGFNMSKWRSFHKYGFSEVEIVKLLSEDNVIGSGASGKVYKVVLSNGEVVAVKKLWRANNKDGSAGFEKDEFEVEVETLGKIRHKNIVKLWCCCNNGDNKLLVYEYMPNGSLGDILHKSKKSLLDWPTRYKVAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFSAKVADFGVAKMFRGANQGTESMSVVAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRPPIDSAYGEEDLVKWVSSTLNQKGIDQVIDPCLDSKYKEEISKVLSVGLLCTNGFPITRPSMRRVVKMLQEASADAKSRGGKKDGKLSPYYQEEPCNQGSTV 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3215 1018 SUPERFAMILY Protein kinase-like (PK-like) 709 986 IPR011009 -
Bisa02g3215 1018 SMART serkin_6 711 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3215 1018 MobiDBLite consensus disorder prediction 992 1018 - -
Bisa02g3215 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Bisa02g3215 1018 ProSiteProfiles Protein kinase domain profile. 711 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3215 1018 Pfam Leucine rich repeat N-terminal domain 53 92 IPR013210 -
Bisa02g3215 1018 Gene3D Ribonuclease Inhibitor 206 337 IPR032675 -
Bisa02g3215 1018 FunFam Leucine-rich receptor-like protein kinase family protein 233 331 - -
Bisa02g3215 1018 ProSiteProfiles Leucine-rich repeat profile. 600 622 IPR001611 GO:0005515
Bisa02g3215 1018 Gene3D Ribonuclease Inhibitor 55 205 IPR032675 -
Bisa02g3215 1018 Gene3D Transferase(Phosphotransferase) domain 1 793 1006 - -
Bisa02g3215 1018 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 213 987 - -
Bisa02g3215 1018 SMART LRR_typ_2 312 336 IPR003591 -
Bisa02g3215 1018 SMART LRR_typ_2 455 479 IPR003591 -
Bisa02g3215 1018 SMART LRR_typ_2 431 454 IPR003591 -
Bisa02g3215 1018 SMART LRR_typ_2 119 143 IPR003591 -
Bisa02g3215 1018 SMART LRR_typ_2 527 551 IPR003591 -
Bisa02g3215 1018 SMART LRR_typ_2 384 407 IPR003591 -
Bisa02g3215 1018 Gene3D Phosphorylase Kinase; domain 1 692 792 - -
Bisa02g3215 1018 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 793 1002 - -
Bisa02g3215 1018 Pfam Protein kinase domain 713 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3215 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 52 215 - -
Bisa02g3215 1018 Gene3D Ribonuclease Inhibitor 338 646 IPR032675 -
Bisa02g3215 1018 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Bisa02g3215 1018 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Bisa02g3215 1018 SUPERFAMILY L domain-like 60 401 - -
Bisa02g3215 1018 FunFam Receptor-like protein kinase HSL1 337 644 - -
Bisa02g3215 1018 SUPERFAMILY RNI-like 338 611 - -
Bisa02g3215 1018 FunFam Receptor-like protein kinase HSL1 694 792 - -
Bisa02g3215 1018 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3215 Bisa-ChrBisa02 81122521 81125677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3215 47 1016 Receptor kinase-like Gene Family AT1G28440 61.421 0.0 1213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g3215 Pkinase 8.7e-46 CL0016