Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3206 ATGCTGCTGGAGAAGATGGACGATGGAGAAATTTCAAATATCGGTTTTCCTCAAGAGAACCACCCTCCAACTGCTGCATCATCTAATAACACTAATCCTACTCCTGTTCTCAAGAGAAAGAGAAACCTCCCAGGAAACCCAGATCCTGAGGCGGAAGTGATAGCGTTATCGCCACACACTTTAATGGCGACGAACAGATTCCTTTGCGAGATTTGCGGGAAGGGGTTTCAGAGGGATCAGAATCTGCAGCTACACCGGCGAGGGCACAACCTGCCATGGAAGCTGAAGCAGAGGACGAGCAAGGAGGTGAGGAAGAGAGTGTACGTGTGCCCAGAGAAGAGCTGCGTGCACAATAATCCTTCGAGAGCTCTGGGGGATCTGACGGGCATCAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGATAAGTGTTCTAAGCGATACGCTGTTCAGTCGGACTGGAAGGCACACTCCAAGACCTGTGGTACTAGAGAATACAAATGCGACTGTGGCACCATCTTTTCACGAAGGGATAGCTTCATCACTCACAGGGCCTTCTGTGATGCCTTAGCAGAAGAAACAGCAAGAGTAAACGCAGGATCCAGCATGACCAACATATGTTACAACAATCCCATCATTGGATCCAATTCTTCTCTAGGCCCTACCAATATAGCAACCCATTTCCCCTCAATCTTCAAGCCAATTTCAAACACAACCGATGAAGCAAACCATGAAACACCCAGAGGACTATCCCTATGGATGATGAGTGATAATCACCACACAGTCATGCCCAGTCATGGTAACATCAATAACCTCCACGATCATCAGATTCATCAAAACCCACTTGTTTCATCACATCATCAAAATCATCAGCAGCAGCTAAATTGGGTGTTTGGAAACAAGATTAGTTCTCCTTCTTGTCAAGAGCTAAGTGTGCCTTCATTGTACAGCTCCCAACATCATCATCATCATCATCATCAGACAATCTCAGCAAACATGTCGGCCACGGCCTTGTTACAGAAAGCTGCTCAAATTGGAGCTACCTCGACCACATCTGACCCGTCATTTATAGGGAGCTTAGGGTTGAAATGTAGTAGTAACATTAACACAAGTCATCAAGAAGATCATGATCATCATCATGGGAGTGACACTAACAAGTATTCAGGGATGTACGGTTCGGGTTCGGTGCTCACTAGTCTTGGAGGTGGAGGGAGTGATCAGACAGAGAACAACTCTGCAAGTGAATTGTCACAAATGGCCCCCTCAAAACGGCAGCAAATAGTACGGAATAGTGATGAACTAAGTGCAGTGGGAGGAGGGCAAACTCGGGATTTCCTTGGTGTTGGTGTACAATCCATCTGCCACCCTTCATCAATCAACGGATGGATCTGA 1404 0.4687 MLLEKMDDGEISNIGFPQENHPPTAASSNNTNPTPVLKRKRNLPGNPDPEAEVIALSPHTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAGSSMTNICYNNPIIGSNSSLGPTNIATHFPSIFKPISNTTDEANHETPRGLSLWMMSDNHHTVMPSHGNINNLHDHQIHQNPLVSSHHQNHQQQLNWVFGNKISSPSCQELSVPSLYSSQHHHHHHHQTISANMSATALLQKAAQIGATSTTSDPSFIGSLGLKCSSNINTSHQEDHDHHHGSDTNKYSGMYGSGSVLTSLGGGGSDQTENNSASELSQMAPSKRQQIVRNSDELSAVGGGQTRDFLGVGVQSICHPSSINGWI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3206 467 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Bisa02g3206 467 Gene3D Classic Zinc Finger 63 90 - -
Bisa02g3206 467 MobiDBLite consensus disorder prediction 390 432 - -
Bisa02g3206 467 SMART c2h2final6 108 138 IPR013087 -
Bisa02g3206 467 SMART c2h2final6 143 163 IPR013087 -
Bisa02g3206 467 SMART c2h2final6 67 89 IPR013087 -
Bisa02g3206 467 Gene3D Classic Zinc Finger 100 191 - -
Bisa02g3206 467 MobiDBLite consensus disorder prediction 17 37 - -
Bisa02g3206 467 MobiDBLite consensus disorder prediction 372 432 - -
Bisa02g3206 467 FunFam protein indeterminate-domain 5, chloroplastic-like 121 200 - -
Bisa02g3206 467 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 455 IPR031140 -
Bisa02g3206 467 MobiDBLite consensus disorder prediction 1 48 - -
Bisa02g3206 467 SUPERFAMILY beta-beta-alpha zinc fingers 66 163 IPR036236 -
Bisa02g3206 467 FunFam protein indeterminate-domain 12-like 46 114 - -
Bisa02g3206 467 MobiDBLite consensus disorder prediction 374 388 - -
Bisa02g3206 467 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3206 Bisa-ChrBisa02 81062283 81064851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3206 32 467 IDZ Gene Family AT1G03840 52.295 7.24e-142 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g3206 None None None