Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3192 ATGAAGAGATTGAATAGAAGAAGCACACCTAAAGTATTCAGATATGGAAGAAGAAAAGAAAGCAGAGACACAGATATGTCAAGCAAAATGGGGAAAGTTGATTTGAATGATGTAGAATGGATCAATAAGATTCCAGAGTGTCCAGTATATTCTCCATCAGAACAAGAGTTCGAGGATCCGTTAGTTTATCTGCACAACATTGCTTTTGAGGCTTATAAATATGGAATATGCAGAATTGTGTCTCCTATAAATGCCTCTATTCCAGCTGCTGTTGTGCTTATGAAAGAGATAAAAGACTTCAAGTTTGAAACCATTGTACAGCCTCTTCGGCTTTCTGAAGGGAATGAGAACAATGACATAATCTTTTCCATGAGAGGCAGAAAATACACATATCGTGAATTTGAGAATGTGGCAAACAAGGCCTTTTTGAGTAGGTTTTACAGTTGTGGAGATCTCCCTTGTTCTTATGTGGAGAAGTTGTTCTGGCATGAGATGGAGCATGGAGAGAGAGGAACAGTTGAGTATGGAGTCAATGTTGAAGGTAGTGCTTTTTCATGTGACCCTCATGACAATCTTGGAAGAAGCAAGTGGAATTTGAAGAATTTTTCACGGCTGTTGGAATCCACATTGAGATTGATTGACAGAAAAATTCCTGGAATAACTGATCCTATGCTTTACATTGGGATGTTATTTAGCATGTTTGCATGGCACGTAGAAGATCACTATTTGTATAGCATTAACTATCATCACTCAGGAGCAAACAAAACCTGGTATGGCATTCCTGGCTATGCAGCCTCTCAATTTGAGAAGGTGGTGTTAGATCATGTGCACTGCAATAAGATTCTATCACAGCATTCAGAGGATGGGGCATTCCAAGTTCTTGCTCATAAGACAATCATGTTTTCTCCGAATGTGTTGTTGCAACATGATGTGCCAGTTTACAAGGCTGTGCAAAAGCCAGGGGAGTTTGTCATCACCTTTCCTAGAGCATATCATGCTGGATTTAGTCATGGTTTTAGCTGTGGAGAAGCTGTGAATTTTGCTATGAGTGATTGGTTTCTGCTAGGAGCTGAAGCTACCAGGCGTTATGCACATCTTGGAATGCTGCCAATTATCCCTTATGAGGAACTTCTTTGCAAAGAGGCTATGCTCATTTTCAAGGCCTCAAAAGTCAGAGGCTTTAAGAACAGATCTAAAGATTTAGCATCCCACCATGCAACTACTAAGTTATGCTTCATGCATCTTATGCAAGTTTACAAAAAGGCCCTTTGGAGACTCAACTGCTCAAGCAAGTCTTCAAGCTCTTCAAATTTAGTAGGTACTGTAGTATGCAGCCACTGCCATAGAGACTGTTATGTGGCTTACATGTTCTGCAAGTACTGTTATTCTCATCCCATTTGTCTTTTCCATGACTTTGAGACTCAGACTTGCTCATGTGGTAGACAATATACAATTTTCAAGACAGATGACTGGTTGGCATTGAAAGATGCTGCAACAAGTTTTGAGCAGCAAAAAGATACTCTTTTGGCAGTTCAAGGAGAAATGACTTGTGGAGTAAATGTGATATCTCTCTCAAGGATATTCTCCCATAGAAAAAAAATGTTCAAGATATCAAGAACAAAACTTGCCATGAAGAAACATGTGCCAGGGCAACCAGTTCTTCCATGCAAAGAGAGTACCTAG 1683 0.3981 MKRLNRRSTPKVFRYGRRKESRDTDMSSKMGKVDLNDVEWINKIPECPVYSPSEQEFEDPLVYLHNIAFEAYKYGICRIVSPINASIPAAVVLMKEIKDFKFETIVQPLRLSEGNENNDIIFSMRGRKYTYREFENVANKAFLSRFYSCGDLPCSYVEKLFWHEMEHGERGTVEYGVNVEGSAFSCDPHDNLGRSKWNLKNFSRLLESTLRLIDRKIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGANKTWYGIPGYAASQFEKVVLDHVHCNKILSQHSEDGAFQVLAHKTIMFSPNVLLQHDVPVYKAVQKPGEFVITFPRAYHAGFSHGFSCGEAVNFAMSDWFLLGAEATRRYAHLGMLPIIPYEELLCKEAMLIFKASKVRGFKNRSKDLASHHATTKLCFMHLMQVYKKALWRLNCSSKSSSSSNLVGTVVCSHCHRDCYVAYMFCKYCYSHPICLFHDFETQTCSCGRQYTIFKTDDWLALKDAATSFEQQKDTLLAVQGEMTCGVNVISLSRIFSHRKKMFKISRTKLAMKKHVPGQPVLPCKEST 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3192 560 SUPERFAMILY Clavaminate synthase-like 122 383 - -
Bisa02g3192 560 Gene3D Cupin 47 411 - -
Bisa02g3192 560 ProSiteProfiles JmjN domain profile. 47 88 IPR003349 -
Bisa02g3192 560 SMART JmjN_1 46 87 IPR003349 -
Bisa02g3192 560 SMART cupin_9 191 364 IPR003347 -
Bisa02g3192 560 ProSiteProfiles JmjC domain profile. 191 364 IPR003347 -
Bisa02g3192 560 Pfam JmjC domain, hydroxylase 224 347 IPR003347 -
Bisa02g3192 560 MobiDBLite consensus disorder prediction 14 28 - -
Bisa02g3192 560 MobiDBLite consensus disorder prediction 1 28 - -
Bisa02g3192 560 Pfam jmjN domain 48 80 IPR003349 -
Bisa02g3192 560 PANTHER LYSINE-SPECIFIC DEMETHYLASE 39 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3192 Bisa-ChrBisa02 80542027 80546534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3192 44 510 JUMONJI Transcription Factor Family AT2G34880 30.241 7.59e-58 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa02g3192 JmjC 5.6e-40 CL0029