Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3184 ATGTTCCGACCATTCCAGGGAAGAACGGAGTCCGACGACCACAGAGATTTGAACACCAAGATCTTGCTGGCAGCCATCGTCTCCTTATCCTTCGTCTTAGTCCTCGTCTTGGCCCTCCATCTCTACGCGAGGTTCGTCCTCCGCCGCCAGGCCCGCCGCCGCGCCGCCATCCACCACCTCAGCTTCACGGTGGCCCAAGCCCACTACTCCCCCGGCGAACCCCCCAATAACGCCGGACTCGACCCCGCCCTCATCGCCTCTCTCCCCATCTTCGTCTTCAAGCGAAAGAAACACAAATCTCAGAACGACGATAAAGAAGAAGACGAAGACGATTCCTCTGTTATAGAATGCTCTGTTTGTTTGAGCAATCTGGAGGATGAAGAAACGGCGAGGATGCTACCCAATTGCAAGCACGTGTTCCACGTCGGCTGCATCGACACGTGGCTGGCTTCCCACTCCACCTGCCCAATTTGTCGAACCGCGGTTCGGCCGCTGATCCAGCCAGAGCCACGTGAGGGTCCCGTCCTAATATCTCCGGCTGCTGCCGATGATGCGCCGCCTACAGCTCCGCCGTTGGCGGTGGAACCCATTGTAGAAGGTACATCCGATGGTGGTGGGGCTAAGATTAATGCTTCGAGCTCGAGGATGAGCTCTTTCAGAAGGATTCTGAGTAGGGAAAGGTCGTCCAGAAGAATCCAACTTGATTCTTCAACACAAGATCATAATATTGATCGTGATTTGGAAAGACAATGA 753 0.5498 MFRPFQGRTESDDHRDLNTKILLAAIVSLSFVLVLVLALHLYARFVLRRQARRRAAIHHLSFTVAQAHYSPGEPPNNAGLDPALIASLPIFVFKRKKHKSQNDDKEEDEDDSSVIECSVCLSNLEDEETARMLPNCKHVFHVGCIDTWLASHSTCPICRTAVRPLIQPEPREGPVLISPAAADDAPPTAPPLAVEPIVEGTSDGGGAKINASSSRMSSFRRILSRERSSRRIQLDSSTQDHNIDRDLERQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3184 250 CDD RING-H2_EL5-like 116 159 - -
Bisa02g3184 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 165 IPR013083 -
Bisa02g3184 250 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 17 235 - -
Bisa02g3184 250 MobiDBLite consensus disorder prediction 220 250 - -
Bisa02g3184 250 FunFam E3 ubiquitin-protein ligase ATL6 71 164 - -
Bisa02g3184 250 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Bisa02g3184 250 SUPERFAMILY RING/U-box 116 166 - -
Bisa02g3184 250 MobiDBLite consensus disorder prediction 197 250 - -
Bisa02g3184 250 Pfam Ring finger domain 116 159 IPR001841 -
Bisa02g3184 250 SMART ring_2 117 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3184 Bisa-ChrBisa02 80457020 80457772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3184 16 250 C3H Transcription Factor Family AT2G42360 46.835 1.23e-55 176