Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3169 ATGGAAGAATTTGATTGGAGTTCAGGTGTTTGTGGAAATGCCTCAGAGAGAAGTCCTGATGGTTTTCTGGTTAACTCTGCTGCAATAGGAAGTGGGTTTGCTTCGTCTTCGTCTTTGGTTTTGGATAGTGAGAGGGGAGAGCTTGTGGCTGCCCCTGCTAATTTGGAACGCAAGGGTGTGTCCACTGAGAGAAGTATTGAAGCTTTGAAGAACCATAGTGAGGCAGAGAGGAGGAGGAGGGCAAGGATTAATGCACATCTTGATACACTTAGGAGTGTGATTCCTGGTGCTAATAAGATGGACAAAGCGTCATTACTTGCTGAGGTTATCAGACATTTGAAAGAACTGAAAAAGACTGCAGCCCAAGCATGTGAAGGATTTATGATACCGAAGGACAGTGATGAAATCAGAGTTGAAGAACAGGAGGGCGGGTCAAATGGTTTTCCTTATTCATTTAGGGCATCTCTCTCTTGTGAATATAAACCTGGCTTGTTGTCTGATATAAGACAAGCACTTGATGCTCTTCATCTTATGATAATGAGGGCAGAAATTGCAACACTAGGAGGCAGGATGAAGAATGTCTTTGTTATAATTAGCTGCAAAGAACAGAACATCGAAGATGCTGCATACCGTCAGTTTCTTGCTGGCTCGGTTCACCAAGCTATTAGGTCTGTACTTGATAGATTTTCTTCTTCACAGGACCTCTTAGGAACCAGGAAGAGACGGAGAATTTCTATATTCAGTTCATCATCAATAGGAGATTTCTTGCGAGCTGCACCTTTTAAATAA 789 0.4259 MEEFDWSSGVCGNASERSPDGFLVNSAAIGSGFASSSSLVLDSERGELVAAPANLERKGVSTERSIEALKNHSEAERRRRARINAHLDTLRSVIPGANKMDKASLLAEVIRHLKELKKTAAQACEGFMIPKDSDEIRVEEQEGGSNGFPYSFRASLSCEYKPGLLSDIRQALDALHLMIMRAEIATLGGRMKNVFVIISCKEQNIEDAAYRQFLAGSVHQAIRSVLDRFSSSQDLLGTRKRRRISIFSSSSIGDFLRAAPFK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3169 262 CDD ACT_UUR-ACR-like 155 226 - -
Bisa02g3169 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 122 IPR036638 GO:0046983
Bisa02g3169 262 SMART finulus 73 122 IPR011598 GO:0046983
Bisa02g3169 262 PANTHER TRANSCRIPTION FACTOR BHLH30 33 248 IPR045847 GO:0003700|GO:0006355
Bisa02g3169 262 Gene3D - 62 124 IPR036638 GO:0046983
Bisa02g3169 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Bisa02g3169 262 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3169 Bisa-ChrBisa02 80200629 80202252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3169 34 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 38.053 5.36e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g3169 HLH 4.5e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3169 02 80200629 80202252 Bisa02g3169 02 80200629 80202252 ECH