Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3149 ATGATGAAGAAGGCAAGTGAACTTTTCATCCTTTATGGGGTTGATGCATGTGTGATAGTTTATAGTCTCTACGATCCTCAGCCTGAGGTGTGGCCAACTGGCCATTTCCCATGGGACTCCAACGTGAGGTTCAAGTCAATGCCTGAGTTGGAACAATGCCATTTCTTCATTGTTGGGATTGCAAAGGTTGATGGCGTGCAATTGGTTCAATGTTTTAAGTTTGGAGGAGGTGCTTTTTGTTTAAGAAAGTCATCTCATTTGATTGTGCCTTCTACTGAGGTGGCTCCAGACATGGCTCTGGTTGATGTAACCAAATCTTGCATAGATTCCATTAGACAGATATCAGAGCATGTTGAAGGTGCTATTGTTTGCTTAGATGCTGGGACTACAGAGAGTTTCCAGTTTAGTGGGGCATATCCTGTACTTCTAGAACTTGGAGCACGAGCTATTTGCAGTTTGGAAAACATGAGTCCACTTGATGCGGTGGTTGATTGGAACTCCTATTTTAATCCTGCGAGGAAGCTTGTCGTTATCACATCAAGTCTACTAAGCAATGCACATCGGTATATTTTACGTTGCCTGAGCACGCATCAAACTGTCCGTCACTGTATTATATTTACATCTATCTCAGAGGTAGCTCATTCAGCATTTCCTGATTCACCTTTGGGACCAGATGCATATCAGGAATATGAATCCTTGTTGGTTCAAGATTATGAAGAACTAATTAAGAAATCTGGGTCAAATTCTAGGCTGTTTGGCAGCAACTTACAGGGAAATTTGAACTTTGAAGAAGGACACTCACGATTTCTTTCCAGTGGAAAAGATGTTCCTCATTTTGAAGCTAGTTCAAGTGGAAGAAATTCATATGAAGATAATCCATTAGACTACACTGAAGATGCAGGGTCCAAATTGATTGTTTCTGTTAATCATTTTCCTATGATTTTATGTCCCATTTCACCAAAAGTATTTGTTTTACCTTCAGAAGGGTTGGTAGCTGAAGCATACTTATCCACTGAACACGAAGATTCCCTTAGTCCTGGGTTGCCTCCCTTAAGCACTGGTGCACTCTCTGATTTCGATGAGGTGCCTCCAGGGGCAACTCTTACAGCACACTTTCTCTACCATTTGGCATCCAAGATGGACTTGAAATTGGAAATTTTCTCCCTTGGTGATATGTCAAAAGCTGTTGGGAAGCTTCTGACAGGCATGTCAAGTCTGTATGATGTAGGCCGCCGTAAACAATCAGCAGGGCTGTTACTGATTGATCGCACACTTGATCTTCTTACTCCTTGCTGTCATGGGGACTCTCTAGTTGATCGTATGTTTTCATGTTTGCCCCGTAGGAGTAGAACAACTCCCCATCCCCAAGTTAAGGGTTCAGGAACCCAACTCAAACATCACACTTCCTACCTGCAACGCCCTCCCTTAGATGTTCAAATACCACTTGGGAAGATACTAATTGAAGAAGATTGCCAACTGGACCATTTTCGTCTTTTAGAAAGTGTTGAAGCTTTTCTTTGTGGATGGAATTCCTGTTCCTCTGATTCTCAGCTTGCAGATTTATTCAATCTTAGTCAGAGAATTCATGAAAAGCCTCTTCACTCTGTCGTAGAGATGCTCACTGGGTCTTTAATATCATCTGAAAATTTCCGTGGAATGCCATTCTTGGAAGCTTTACTAGATAGAAGAACAAAAGATGGAGCCATACTAGTAAAGAAATGGTTACAAGAAACTTTGCGCAGGGATAATGTAAATGTGAATGTGAAATCTCGTCCTGGTCATGTAACAAAACCAGAGTTGCAAGCTATGATCAAAGCATTGGGCAGGAGCCAATCGTCTTTAGTGAGAAACAAAGGAATTATTCAATTAGCTTTTGCCACTCTATTGACCCTTGAGGAATCAACTTGTGCCAAATGGGATGCATTTATCAGTGCTGAGAAGATTCTTAGTGTAAGTTCTGGAGAAACCAGTCAAAGTCTTGCTGCACAAATTGGTGATCTCATCAATAAGAGTGCTTTATTGGGATCACATGGAAATAAAGCTCAAAAGGAGCTCTCAGAAGGGGTACTATCTTTGCAAGATGCTTTGTTATTGATGATTGTTGGATATATATTGGCTGGGGAGAATTTTCCAACATCTGGGTCTGATGGCCCATTCTCTTGGCAAGAGGAACATTTGTTAAAAGAAGCTGTTGTGGATGCCATTCTTGAAAATCCATCGGTAGCCAAACTCAAGTTTCTAGATGCACTAAGGGAAGAGCTTGAAGCTAATCTAAGTGTGTCAAAGTCAGAAGAAACAACCAAAGAATCTCCAAAACTAGACATTGATGATCTTGACGATGACCAATGGGGCAAATGGGGCGATGAAGATGTTGAGGATGATAATAAAAATGAGCAAGCGTATGGTGACATGCAGCTGAAGTTGGAGTTGCGTGATAGGGTGGATCACCTTTTTAAATTCCTTCATAAGTTGTCCAATTTGAAAAGAAAAAATATACCAACGAGGGATGGATCGTTGACCATGGAGGCTAATTTTAGTGATGATGCCTCAATGGGGAAAGGATTACTTTATAAACTGCTAACAAGGGTGTTGGGCAAGTTTGATGTACCGGGGTTAGAATATCATTCTTCCACTGTGGGGCGTTTTTTGAAGAGTGGGTTTGGAAGATTTGGCCTTGGTCAGGCAAAGCCTAGTCTTGCTGATCAGAACGTCATTTTGGTGTTTGTGATTGGAGGCATCAATGGGCTTGAGGTACGTGAAGCTCAGGAAGCCTTGTCTGAAAGCGGAAGACCTGATATGGAATTGCTTCTTGGGGGAACAACTCTACTTACACCTGATGACATGCTTGGGTTACTATTGGGGGACTCCAGTTACATTTGA 2880 0.4174 MMKKASELFILYGVDACVIVYSLYDPQPEVWPTGHFPWDSNVRFKSMPELEQCHFFIVGIAKVDGVQLVQCFKFGGGAFCLRKSSHLIVPSTEVAPDMALVDVTKSCIDSIRQISEHVEGAIVCLDAGTTESFQFSGAYPVLLELGARAICSLENMSPLDAVVDWNSYFNPARKLVVITSSLLSNAHRYILRCLSTHQTVRHCIIFTSISEVAHSAFPDSPLGPDAYQEYESLLVQDYEELIKKSGSNSRLFGSNLQGNLNFEEGHSRFLSSGKDVPHFEASSSGRNSYEDNPLDYTEDAGSKLIVSVNHFPMILCPISPKVFVLPSEGLVAEAYLSTEHEDSLSPGLPPLSTGALSDFDEVPPGATLTAHFLYHLASKMDLKLEIFSLGDMSKAVGKLLTGMSSLYDVGRRKQSAGLLLIDRTLDLLTPCCHGDSLVDRMFSCLPRRSRTTPHPQVKGSGTQLKHHTSYLQRPPLDVQIPLGKILIEEDCQLDHFRLLESVEAFLCGWNSCSSDSQLADLFNLSQRIHEKPLHSVVEMLTGSLISSENFRGMPFLEALLDRRTKDGAILVKKWLQETLRRDNVNVNVKSRPGHVTKPELQAMIKALGRSQSSLVRNKGIIQLAFATLLTLEESTCAKWDAFISAEKILSVSSGETSQSLAAQIGDLINKSALLGSHGNKAQKELSEGVLSLQDALLLMIVGYILAGENFPTSGSDGPFSWQEEHLLKEAVVDAILENPSVAKLKFLDALREELEANLSVSKSEETTKESPKLDIDDLDDDQWGKWGDEDVEDDNKNEQAYGDMQLKLELRDRVDHLFKFLHKLSNLKRKNIPTRDGSLTMEANFSDDASMGKGLLYKLLTRVLGKFDVPGLEYHSSTVGRFLKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEVREAQEALSESGRPDMELLLGGTTLLTPDDMLGLLLGDSSYI 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3149 959 Pfam Sec1 family 639 949 IPR001619 GO:0016192
Bisa02g3149 959 SUPERFAMILY Sec1/munc18-like (SM) proteins 303 434 IPR036045 -
Bisa02g3149 959 Gene3D - 819 953 IPR027482 -
Bisa02g3149 959 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 111 949 IPR001619 GO:0016192
Bisa02g3149 959 SUPERFAMILY Sec1/munc18-like (SM) proteins 880 953 IPR036045 -
Bisa02g3149 959 Gene3D - 316 435 IPR027482 -
Bisa02g3149 959 SUPERFAMILY SRF-like 1 36 IPR036879 GO:0003677|GO:0046983
Bisa02g3149 959 Coils Coil 744 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3149 Bisa-ChrBisa02 79658503 79668273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3149 7 52 Type I MADS-box Gene Family AT5G48670 43.478 5.66e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bisa02g3149 Sec1 5e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3149 02 79658503 79668273 Bisa02g3149 02 79658503 79668273 ECH