Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3142 ATGGCGGCGATGAGAGCGGCAGTGGCGGCGCCTCGCGGTCTACGGCGGCTATTCTGCACCACTCCCACTTCCACCTTCATTCCTCCTCCGCCAACGGCGGCTTCTCCTGCTCGAGAGAATGCCGAGCCCAGCACCAATCTTTTCGTCTCTGGGCTTAGCAAACGTACTACTACAGAAAGACTACGGGAGGCATTTTCCCAGTTTGGTGAAGTTGTTCATGCTAGAGTGGTAACTGATAGAGTATCAGGTTACTCTAAAGGGTTTGGTTTTGTAAAATATGCAAGTATAGAAGAAGCTGGAAAGGGCATCGAAGGCATGGATGGAAAGTTTCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCTCCACCGGGACAACCTGGACAACCTGCGTCTCCACCATACGGCCAGCCTGCATCTCCTCCATATGGCCAGCGGTGA 450 0.5244 MAAMRAAVAAPRGLRRLFCTTPTSTFIPPPPTAASPARENAEPSTNLFVSGLSKRTTTERLREAFSQFGEVVHARVVTDRVSGYSKGFGFVKYASIEEAGKGIEGMDGKFLDGWVIFAEYARPRPPPGQPGQPASPPYGQPASPPYGQR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3142 149 SMART rrm1_1 46 119 IPR000504 GO:0003723
Bisa02g3142 149 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 123 IPR000504 GO:0003723
Bisa02g3142 149 MobiDBLite consensus disorder prediction 121 149 - -
Bisa02g3142 149 SUPERFAMILY RNA-binding domain, RBD 25 146 IPR035979 GO:0003676
Bisa02g3142 149 Gene3D - 28 130 IPR012677 -
Bisa02g3142 149 PANTHER NUCLEOLAR PROTEIN 8 28 133 - -
Bisa02g3142 149 MobiDBLite consensus disorder prediction 123 149 - -
Bisa02g3142 149 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 113 IPR000504 GO:0003723
Bisa02g3142 149 FunFam RNA recognition motif-containing protein 24 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3142 Bisa-ChrBisa02 79489943 79492431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3142 44 149 Eukaryotic Initiation Factors Gene Family AT4G34110 31.405 9.03e-10 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3142 02 79489943 79492431 Bisa02g3142 02 79489943 79492431 ECH