Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3134 ATGGACTCACAGCAGCTTTTCGGTTACACTGTGGCTGGTTCTGGACTAACTTACACATCATCTCATCCGGCTTTTTCGTCGCTACCCAAGGGGCTTCTTGAATCCTTGAAAGTGGGCTTAGGAAACTCACCTAATTCCCCCTTTTCTACTCACTTTGATTCTGATGCTCCTTCTACATTGAGTGACAGCCAGGATAATAAGCATATCTCGGGGGAGATTCTGTCTGGGGTGAGCCCTTCTTGCAACTCCTGCAAAACTAATAACTATTTCCACAGTTCAACAACCTCATCGGCCAACTGTATCCAACACAGTCTGCATCTATATGATGCAAGTTCTAGCCAGAATATCACACACAAGCTGAGAGAATTAGAGACCACTCTGATGGCCCCCGACAATGTTAATGAAGCTACCACATCAGATAGTTCCTTGGGTAAGATTGAGAGTAGCCAGCCAATGACCTCTGTCCCTAAAAATAGATCCTGGAGCCATGACTACCAGGGACTACGATATATCCAAAGTCAGCCGTCTTTTGTTGCTAGCAGTAGGCAGTCTAGTGAAGTTGCACATGCAGAGAAACGCCACAAATCAATGGAGGAAGAATTCTTACGAGACTTCTCATCAAGCAGTTTGAGGCAATTGCTGCTTGCATGTGCAAAAGCTCTCTCAGAAAACAACCGGGAAGACTTTGATCAGTTGATTCAAAACGCTAGAAGTTTTGTGTCTATTACTGGGGCACCAATCCAACGGCTTGGTGCTTATTTAGTTGAAGGGCTAGTTGCGAGGAAGGAGGGATCGGGGAACAATATCTACCGTGCCATTAAGTGTCAGGAACCTGAAGGCAAAGACCTGCTCTCTTACATGCATATGCTGTATGAAATCTGCCCGTACTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAGAAATGAGGACCGGATTCACATCATAGACTTTCAGATTGCCCAGGGAAGTCAATGGGTGACTCTCCTTCAAGCCCTTGCAGCAAGACCCCGTGGAGCTCCCTACGTGCGGATCACGGGGATTGACGACCCTGTTTCTCGATATGCTCGTGGTCATGGGCTAGAATTAGTTGGGAAACGGTTGGCCATGATCTCTGAGAAATTTGGCATTCGGGTTGAGTTTCATGGACTGCCTGTTTTTGCACCAGATGTGACAAGGGACATGCTTGATGTCAGACCCGGGGAGGCTTTGGCTGTGAACTTCCCCCTGCAGCTCCATCATACAGCCGATGAGAGCGTTGACGTGAATAACCCGAGAGATGGACTTTTGAGACTGGTAAAGTCACTTTCTCCCAAGGTGACCACATTGGTGGAGCAGGAATCAAACACGAACACAACTCCTTTCTTCAACCGCTTCACAGAAACCTTAAACTATTACTTGGCAATGTTCGAGTCCATTGACGTCACACTCCCGAGAAACAGAAAGGAGCGGATTAATGTGGAGCAACATTGCCTGGCAAGGGATGTGGTGAACATTATTGCCTGTGAAGGGAAGGATAGGGTGGAGCGACACGAACTGTTCGGCAAATGGAAGTCTCGGTTGACAATGGCCGGCTTCCGTCAATATCCAATGAGTTCCTACGTAAATTCTGTTATAAGAAGCCTGCTGAGATGCTACTCAGAGCATTATACACTGGTGGAGAAAGATGGGGCTATGTTGTTGGGGTGGAAGAACAGAAATTTGATATCAGCCTCAGCATGGCATTGA 1743 0.471 MDSQQLFGYTVAGSGLTYTSSHPAFSSLPKGLLESLKVGLGNSPNSPFSTHFDSDAPSTLSDSQDNKHISGEILSGVSPSCNSCKTNNYFHSSTTSSANCIQHSLHLYDASSSQNITHKLRELETTLMAPDNVNEATTSDSSLGKIESSQPMTSVPKNRSWSHDYQGLRYIQSQPSFVASSRQSSEVAHAEKRHKSMEEEFLRDFSSSSLRQLLLACAKALSENNREDFDQLIQNARSFVSITGAPIQRLGAYLVEGLVARKEGSGNNIYRAIKCQEPEGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWVTLLQALAARPRGAPYVRITGIDDPVSRYARGHGLELVGKRLAMISEKFGIRVEFHGLPVFAPDVTRDMLDVRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFTETLNYYLAMFESIDVTLPRNRKERINVEQHCLARDVVNIIACEGKDRVERHELFGKWKSRLTMAGFRQYPMSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWH 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3134 580 Pfam GRAS domain family 210 579 IPR005202 -
Bisa02g3134 580 ProSiteProfiles GRAS family profile. 201 580 IPR005202 -
Bisa02g3134 580 Coils Coil 180 200 - -
Bisa02g3134 580 MobiDBLite consensus disorder prediction 47 66 - -
Bisa02g3134 580 MobiDBLite consensus disorder prediction 133 159 - -
Bisa02g3134 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 172 576 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3134 Bisa-ChrBisa02 79303017 79304759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3134 78 579 GRAS Transcription Factor Family AT5G48150 52.087 7.99e-175 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa02g3134 GRAS 1.6e-125 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0683 12 10845831 10847594 Bisa02g3134 02 79303017 79304759 CCT
Bisa02g3134 02 79303017 79304759 Bisa02g3134 02 79303017 79304759 ECH